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(Software and tools)
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*[[FusionSeq]]: a computational framework to identify fusion transcripts from paired-end RNA-Seq data.
*[[FusionSeq]]: a computational framework to identify fusion transcripts from paired-end RNA-Seq data.
*[[ACT Tool]]: for aggregation and correlation analyses of genomic signal tracks
*[[ACT Tool]]: for aggregation and correlation analyses of genomic signal tracks
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*[[PeakSeq]]: a computational tool for analyzing ChIP-Seq data
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*[[FAQ]] (new) on programs
*[[FAQ]] (new) on programs

Revision as of 15:28, 25 August 2010

This wiki hosts general, public information about the Gerstein Lab. Lab members should consult the private lab wiki for lab-specific information (login as user "public"). There's also a wiki for lab meetings (login as user "private"). To edit this wiki, contact the Infoadmin

Contents

Important Public Items

(not on the homepage yet, but will be soon)

Software and tools

  • RSEQtools: a computational suite for the analysis of RNA-Seq data including a compact and "privacy-aware" data format.
  • FusionSeq: a computational framework to identify fusion transcripts from paired-end RNA-Seq data.
  • ACT Tool: for aggregation and correlation analyses of genomic signal tracks
  • PeakSeq: a computational tool for analyzing ChIP-Seq data


Info for New People

Info for Lab Members and Collaborators

Personal tools