Theses

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Past PhD Students
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This is a table listing the past graduate students from the Gerstein Lab with available theses and defense presentations for download.
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Andrew Smith
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'''Abbreviations:'''
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<br>CBB: PhD from Computational Biology and Bioinformatics
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  AS
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  <br>CS: PhD Department of Computer Science
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<br>MB&B: PhD Molecular Biochemistry and Biophysics
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9/2002 – 8/14/2007
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<br>MCDB: PhD Molecular, Cell and Developmental Biology
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<br>adv degree: advanced degree/further studies
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CS
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<br>jt: joint student
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<br>
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industry Bristol-Myers Squibb
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{| border="1" cellpadding="1"
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Bioinformatics Developer, Bristol-Myers Squibb 311 Pennington-Rocky Hill Road Pennington, NJ
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! scope="col" width="50" align="center" style="background:#f0f0f0;"|'''Alumni'''
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Dov Greenbaum
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! scope="col" width="50" align="center" style="background:#f0f0f0;"|'''Lab ID'''
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! scope="col" width="50" align="center" style="background:#f0f0f0;"|'''Lab Dates'''
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DG
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! scope="col" width="50" align="center" style="background:#f0f0f0;"|'''Other Info. (Affil., funding, etc.)'''
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! scope="col" width="50" align="center" style="background:#f0f0f0;"|'''Current Position'''
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1999 – 2004
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! scope="col" width="50" align="center" style="background:#f0f0f0;"|'''Institution'''
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! scope="col" width="100" align="center" style="background:#f0f0f0;"|'''Thesis/Defense presentation'''
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Genetics
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|Andrew Smith||AS||2002 – 2007||CS||industry||Bristol-Myers Squibb||[http://homes.gersteinlab.org/people/asmith/outbox/thesis/AS_thesis_draft.pdf Thesis]<br>[http://homes.gersteinlab.org/people/asmith/outbox/thesis/thesis_defense_presentation2.ppt Defense]
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adv degree UC Berkeley, Stanford
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Law Student, UC Berkeley; then Branco Weiss Fellow: Society in Science; Fellow Center for Law and the Biosciences, Stanford University
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|Chong Shou||CS||2005-2011||CBB (jt. w. M Snyder)||industry||MF Global||[http://archive.gersteinlab.org/meetings/2011/03.18/CS_Thesis_2011.pdf Thesis]<br>[http://archive.gersteinlab.org/meetings/2011/04.19/THE_Defense.ppt Defense]
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Haiyuan Yu
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|Dov Greenbaum||DG||1999 – 2004||Genetics||adv degree||UC Berkeley, Stanford||
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HY
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|Haiyuan Yu||HY||2000 – 2005||MB&B||--||Cornell U||
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2000 – 2005
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|Jiang Du||JDU||2004 – 2010||CS (jt. w. D McDermott)||industry||JP Morgan|| [http://archive.gersteinlab.org/docs/2010/05.31/jdu_phd_thesis.pdf Thesis]<br>[http://archive.gersteinlab.org/docs/2010/05.31/jdu_phd_defense.pdf Defense]
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MB&B
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|Kevin (Yuk-Lap) Yip||KY||2004 - 2009||CS||faculty||The Chinese University of Hong Kong||
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-- Cornell U
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Assistant Professor
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|Michael Seringhaus||MS||2001 – 2007||||adv degree||Alaska Supreme Court||
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Jiang Du
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|Paul Bertone||PB||1998 – 2005||MCDB (jt. with M Snyder)||faculty||EBI||
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JDU
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|Prianka Patel||PP||2004 – 2010||MB&B (jt. w. D Engelman)||--||--||[http://wiki.gersteinlab.org/labinfo/Theses Thesis/Defense]
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9/2004 – 2/2010
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|Rajdeep Das||RD||1998 – 2004||Chemistry||postdoc||CSHL||
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CS (jt. w. D McDermott)
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|Ronald Jansen||RJ||1997 – 2002||MB&B||industry||Goldman Sachs||
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industry JP Morgan
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Michael Seringhaus
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|Samuel Flores||SF||2004 – 2007||Physics||postdoc||Stanford||
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MS
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|Tara Gianoulis||TG||2003 – 2009||CBB (jt. w. M Snyder)||postdoc||Harvard||
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9/2001 – 9/4/2007
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|Ted Johnson||TJ||1996 – 2003||MB&B||--||
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|Thomas Royce||TR||2002 – 2007||CBB||industry||Illumina||
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adv degree Alaska Supreme Court
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Law Clerk to Justice Craig F. Stowers
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|Vadim Alexandrov||VA||1998 – 2003||||industry||--||
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Paul Bertone
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|William Grenawitzke||WG||2006 – 2006||Cellular & Molecular Physiology||--||
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PB
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|Werner Krebs||WK||1996 – 2001||||postdoc||SDSC||
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1998 – 2005
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|Hugo (Yu Kor) Lam||YHL||2005 – ?||CBB||--||--||[http://archive.gersteinlab.org/meetings/2010/05.31/YHL_Thesis_20100525.pdf Thesis]<br>[http://archive.gersteinlab.org/meetings/2010/05.31/YHL_Defense_20100520.pptx Defense]
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MCDB (jt. with M Snyder)
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|Yuen-Jong Liu||YJL||2004 – 2009||Medical Student||--||Harvard Medical School||
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faculty EBI
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Group Leader, EBI, Cambridge, UK
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Prianka Patel
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PP
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9/2004 – 5/31/2010
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MB&B (jt. w. D Engelman)
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-- --
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Rajdeep Das
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RD
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1998 – 2004
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Chemistry
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postdoc CSHL
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Post-Doc, CSHL; then Law Student
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Ronald Jansen
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RJ
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1997 – 2002
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MB&B
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industry Goldman Sachs
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Goldman Sachs, New York
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Samuel Flores
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SF
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9/2004 – 7/30/2007
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Physics
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postdoc Stanford
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Post-doc, Distinguished Simibios Fellow, Stanford University
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Tara Gianoulis
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TG
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9/2003 – 8/2009
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CBB (jt. w. M Snyder)
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postdoc Harvard
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Post-Doc, Church Lab, Harvard Med
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Ted Johnson
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TJ
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1996 – 2003
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MB&B
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-- --
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Thomas Royce
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TR
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5/2002 – 9/25/2007
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CBB
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industry Illumina
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Scientist, Illumina Inc, 9885 Towne Centre Drive, San Diego, CA 92121-1975
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Vadim Alexandrov
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VA
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1998 – 2003
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industry --
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Bioinformatics Consulting
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William Grenawitzke
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WG
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5/2006 – 12/2006
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Cellular & Molecular Physiology
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-- --
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Werner Krebs
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WK
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1996 – 2001
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postdoc SDSC
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Post-Doc at PDB at SDSC, Industry
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Hugo (Yu Kor) Lam
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YHL
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9/2005 – ?
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CBB
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-- --
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Yuen-Jong Liu
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YJL
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8/2004 – 6/2009
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Medical Student
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-- Harvard Medical School
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Surgery Resident
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Latest revision as of 14:37, 7 July 2011

This is a table listing the past graduate students from the Gerstein Lab with available theses and defense presentations for download. 

Abbreviations:

CBB: PhD from Computational Biology and Bioinformatics

CS: PhD Department of Computer Science

MB&B: PhD Molecular Biochemistry and Biophysics

MCDB: PhD Molecular, Cell and Developmental Biology

adv degree: advanced degree/further studies

jt: joint student


Alumni Lab ID Lab Dates Other Info. (Affil., funding, etc.) Current Position Institution Thesis/Defense presentation
Andrew SmithAS2002 – 2007CSindustryBristol-Myers SquibbThesis
Defense
Chong ShouCS2005-2011CBB (jt. w. M Snyder)industryMF GlobalThesis
Defense
Dov GreenbaumDG1999 – 2004Geneticsadv degreeUC Berkeley, Stanford
Haiyuan YuHY2000 – 2005MB&B--Cornell U
Jiang DuJDU2004 – 2010CS (jt. w. D McDermott)industryJP Morgan Thesis
Defense
Kevin (Yuk-Lap) YipKY2004 - 2009CSfacultyThe Chinese University of Hong Kong
Michael SeringhausMS2001 – 2007adv degreeAlaska Supreme Court
Paul BertonePB1998 – 2005MCDB (jt. with M Snyder)facultyEBI
Prianka PatelPP2004 – 2010MB&B (jt. w. D Engelman)----Thesis/Defense
Rajdeep DasRD1998 – 2004ChemistrypostdocCSHL
Ronald JansenRJ1997 – 2002MB&BindustryGoldman Sachs
Samuel FloresSF2004 – 2007PhysicspostdocStanford
Tara GianoulisTG2003 – 2009CBB (jt. w. M Snyder)postdocHarvard
Ted JohnsonTJ1996 – 2003MB&B--
Thomas RoyceTR2002 – 2007CBBindustryIllumina
Vadim AlexandrovVA1998 – 2003industry--
William GrenawitzkeWG2006 – 2006Cellular & Molecular Physiology--
Werner KrebsWK1996 – 2001postdocSDSC
Hugo (Yu Kor) LamYHL2005 – ?CBB----Thesis
Defense
Yuen-Jong LiuYJL2004 – 2009Medical Student--Harvard Medical School
Retrieved from "http://info.gersteinlab.org/Theses"
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