Resources Related to Hierarchies

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We have investigated the hierarchical organization of networks in a series of publications.

Human hierarchy based on ChIP-Seq data from ENCODE http://papers.gersteinlab.org/papers/encodenets

Worm and Fly hierarchies constructed from modENCODE ChIP-Seq data http://papers.gersteinlab.org/papers/mirnet http://papers.gersteinlab.org/papers/wormawg


Hierarchy in Yeast transcriptional regulatory network http://papers.gersteinlab.org/papers/nethierarchy/ http://www.gersteinlab.org/proj/nethierarchy


http://papers.gersteinlab.org/papers/hier-rewiring http://papers.gersteinlab.org/papers/nethier



http://papers.gersteinlab.org/papers/callgraph Bacterial hierarchy

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