Encode3rollout

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[[File:encode3.png|800px]]
[[File:encode3.png|800px]]
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The ENCODE project has been extended to model organisms, particularly the mouse. Through the third phase of ENCODE (ENCODE 3) nearly a million and more than 300K cCRE annotations have been generated for human and mouse, respectively, and these have provided a valuable resource for the scientific community. The rollout for the ENCODE consortium phase 3 papers occurred in 7/29/2020. The Gerstein lab is associated with 9 papers (5 core and 3 companion papers).
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The ENCODE project has been extended to model organisms, particularly the mouse. Through the third phase of ENCODE (ENCODE 3) nearly a million and more than 300K cCRE annotations have been generated for human and mouse, respectively, and these have provided a valuable resource for the scientific community. The rollout for the ENCODE consortium phase 3 papers occurred in 7/29/2020. The Gerstein lab is associated with 9 papers (6 core and 3 companion papers).
* Paper Summary http://papers.gersteinlab.org/subject/encode3rollout/index.html
* Paper Summary http://papers.gersteinlab.org/subject/encode3rollout/index.html
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== Core Papers ==
== Core Papers ==
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* Perspectives on ENCODE (https://doi.org/10.1038/s41586-020-2449-8)
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* Perspectives on ENCODE http://papers.gersteinlab.org/papers/encode3perspective/index.html (https://doi.org/10.1038/s41586-020-2449-8)
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* Expanded Encyclopedias of DNA Elements in the Human and Mouse Genomes (https://doi.org/10.1038/s41586-020-2493-4)
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* Expanded Encyclopedias of DNA Elements in the Human and Mouse Genomes http://papers.gersteinlab.org/papers/encode3main/index.html (https://doi.org/10.1038/s41586-020-2493-4)
* ENCODEC http://papers.gersteinlab.org/papers/encodec/index.html (https://www.nature.com/articles/s41467-020-14743-w)
* ENCODEC http://papers.gersteinlab.org/papers/encodec/index.html (https://www.nature.com/articles/s41467-020-14743-w)
* RADAR http://papers.gersteinlab.org/papers/radar/index.html (https://doi.org/10.1186/s13059-020-01979-4)
* RADAR http://papers.gersteinlab.org/papers/radar/index.html (https://doi.org/10.1186/s13059-020-01979-4)

Latest revision as of 23:19, 31 July 2020

Contents

Gerstein Lab publications for ENCODE 3 rollout

The ENCODE project has been extended to model organisms, particularly the mouse. Through the third phase of ENCODE (ENCODE 3) nearly a million and more than 300K cCRE annotations have been generated for human and mouse, respectively, and these have provided a valuable resource for the scientific community. The rollout for the ENCODE consortium phase 3 papers occurred in 7/29/2020. The Gerstein lab is associated with 9 papers (6 core and 3 companion papers).

Nature Special Issue

Core Papers

Companion Papers

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