From GersteinInfo

Contents 1 CAPE Class Diagrams 1.1 CAPE-analyze 1.2 CAPE-compare 1.3 Annotation Library

CAPE Class Diagrams

Unified Modeling Language is a standard language to document class architecture for object-oriented programs. The class diagrams for APE and related libraries can be found below.

CAPE-analyze

CAPE-analyze Main Driver

CAPE-compare

CAPE-compare Main Driver

Annotation Library

Genomic Features

Genomic Subfeatures

Comparators

Enumerated Types

File Readers and Data Analysis

Classes for Encapsulating Scores