Papers Page Code

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Generate publication documents from SpreadSheet

"Papers Page" is generated from two google spreadsheets, "Papers Master" and "Papers Subjects". "Papers Master" stores basic information about each paper. "Papers Subjects" stores information about each grant.

Here is a list of the tags and their meanings:

Papers Master:
<labid> - id by which to refer to the article
<PMID> - PubMed id
<title> - title of the article
<citation> - citation of the article (author, journal, year, etc)
<preprint> - URL of the preprint file
<subjects> - specifies the grant(s) funding the paper (e.g. "cegs,keck")
<website> - supplemental website
<Year> - year the article was published
<footnote> - additional information
<website2> - second supplemental website

The tags can conceptually be divided into two groups: ones such as PMID and title, which serve to identify the paper, and tags such as website and subject which supply supplemental information about the paper. There are two ways to identify a paper (in order of decreasing precedence):

I. PMID
II. title, citation

You should always include the PMID if a paper is known to be listed in PubMed. Option 2 should be used for papers that are in press.

The other group of tags supplies additional information about the paper specified by the first group of tags. All of these tags are optional, however used of <subjects> and <preprint> is strongly encouraged. (Please consult Mark for guidelines on citing grants.)

labid	PMID	title	citation	preprint	subject	website	Year	footnote	website2
metamembrane	20430783			http://archive.gersteinlab.org/papers/e-print/metamembrane/preprint.pdf	interactions	http://metagenomics.gersteinlab.org/membrane	2010

Papers Subjects:
<category> - classification of grants
<labid> - name refer to each grant
<title> - description of each grant
<website> - external website
<html> - additional information

We encourage you to sort <category> after adding new grants because of coding issues. <website> should also be reflected in <html> section. For example, "don" has <website> "http://www.donaghue.org", also "URL: <A HREF=http://www.donaghue.org> http://www.donaghue.org</A>" in <html> section.

category	labid	title	website	html
Research Grants	don	Dongahue Young Investigator	http://www.donaghue.org/	Young investigator award from Donaghue Foundation to M Gerstein (PI), "Comparative Genomics of Microbial Pathogens," (DF98-113, 1/1/99-12/31/03). URL: <A HREF=http://www.donaghue.org> http://www.donaghue.org</A>Articles funded by this grant: