ENCODE-Nets Network Viewer
From GersteinInfo
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== Installation == | == Installation == | ||
| - | The viewer is self-contained. This viewer only requires that PHP to be installed. Installation simply involves dropping the contents of this directory into a directory in your web root. | + | The viewer is self-contained. This viewer only requires that PHP to be installed. Installation simply involves dropping the contents of this directory into a directory in your web root. To add network files, copy them in to the <code>/data</code> directory and reload the viewer. The viewer supports the following file formats: |
| - | |||
* SIF | * SIF | ||
* GraphML | * GraphML | ||
Latest revision as of 10:19, 20 April 2012
The ENCODE-Nets network viewer allows networks and graphs to be visualized interactively in the browser. Nodes and edges may be manipulated and selected to view detailed information. The network viewer uses Cytoscape Web to render the networks.
Installation
The viewer is self-contained. This viewer only requires that PHP to be installed. Installation simply involves dropping the contents of this directory into a directory in your web root. To add network files, copy them in to the /data directory and reload the viewer. The viewer supports the following file formats:
- SIF
- GraphML
- XGMML
Source
The source code for the network viewer may be found at the lab Github.
