Funseq
From GersteinInfo
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== Installation == | == Installation == | ||
The following tools are REQUIRED for FunSeq: | The following tools are REQUIRED for FunSeq: | ||
| - | 1) [http://code.google.com/p/bedtools/downloads/list Bedtools] | + | 1) [http://code.google.com/p/bedtools/downloads/list Bedtools] <br> |
| - | 2) [http://sourceforge.net/projects/samtools/files/ Samtools] | + | 2) [http://sourceforge.net/projects/samtools/files/ Samtools] <br> |
| - | 3) [http://sourceforge.net/projects/samtools/files/tabix/ Tabix] | + | 3) [http://sourceforge.net/projects/samtools/files/tabix/ Tabix] <br> |
| - | 4) [http://vat.gersteinlab.org/index.php VAT] - A good installation guide can be found [http://ngsda.blogspot.com/2011/06/vat.html here]. | + | 4) [http://vat.gersteinlab.org/index.php VAT] - A good installation guide can be found [http://ngsda.blogspot.com/2011/06/vat.html here]. <br> |
Revision as of 20:28, 6 May 2013
Installation
The following tools are REQUIRED for FunSeq:
1) Bedtools
2) Samtools
3) Tabix
4) VAT - A good installation guide can be found here.
