Gerstein Lab Computing in HPC

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= Actual CPU Usage =
= Actual CPU Usage =
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Grace Shared:258,948 h (equivalent to ~120 cores at 100% utilization)
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=== Grace ===
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Grace Dedicated 371,982 h (equivalent to ~175 cores at 100% utilization)
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Grace Shared 258,948 h (equivalent to ~120 cores at 100% utilization)
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Grace Scavenge 362,890 h (equivalent to ~165 cores at 100% utilization)
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Grace Total 993,820 h (~462 cores but own 672)
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Farnam Shared 108,789 h (equivalent to ~50 cores at 100% utilization)
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Grace Dedicated 371,982 h (equivalent to ~175 cores at 100% utilization)
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Farnam Dedicated 262,642 h (equivalent to ~120 cores at 100% utilization)
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Farnam Dedicated - GPU 13,250 h
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Farnam Scavenge 29,527 h (equivalent to 13 cores at 100% utilization)
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Farnam Total 414,208 h (~183 cores but own 536)
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Ruddle Total 1,486 h�
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Grace Scavenge 362,890 h (equivalent to ~165 cores at 100% utilization)
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Available Options (Rough Pricing and subject to change)
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Standard Compute Node (28 cores, 192GB RAM) $12,000
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Grace Total 993,820 h (~462 cores but own 672)
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GPU Node (28 cores, 192GB RAM, 1 V100) $22,000
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Large Memory Node (28 cores, 768GB RAM) $19,000
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Thinksystem D2 chassis (1 per 4 std nodes/2 GPU nodes) $2,000
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Next Steps from 10/19/2018 Meeting
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=== Farnam ===
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Farnam Shared 108,789 h (equivalent to ~50 cores at 100% utilization)
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$55-75k available - Dave to contact Janine Martinez for details of grant(s) and any additional detail on funding available.
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Farnam Dedicated 262,642 h (equivalent to ~120 cores at 100% utilization)
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Purchasing additional storage will be impossible in the time-frame due to the need to purchase in ~1PB increments.
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The nature of the work suggests that Farnam is the appropriate place to put new equipment.
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Farnam Dedicated - GPU 13,250 h
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Prices for:
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Large Memory Node (28 cores, 768GB RAM)
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Farnam Scavenge 29,527 h (equivalent to 13 cores at 100% utilization)
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Large Memory Node (28 cores, 1536GB RAM)  
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Standard Compute Node (28 cores, 192GB RAM)
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Farnam Total 414,208 h (~183 cores)
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Standard Compute Node (28 cores, 384GB RAM)
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Revision as of 12:58, 23 October 2018

Contents

Current Hardware

Compute

Grace

33 nodes, 672 cores purchased in 2015

Farnam

32 nodes, 256 cores purchased in 2010-2011

2 nodes, 64 cores purchased in 2012 (will be shutdown in 2019)

11 nodes, 308 cores purchased in 2018

1 large memory node (1.5TB RAM), 40 cores purchased in 2018

3 GPU nodes (2xNVIDIA K80), 60 cores purchased in 2016

2 GPU nodes (2xNVIDIA P100), 56 cores purchased in 2018

1 GPU node(4xNVIDIA TITAN V), 8 cores purchased in 2018

Total: 20 nodes, 536 cores

  • 32 nodes were shutdown in September 2018

Storage

Loomis

3 TB default allocation

300 TB purchased in 2015

100 TB purchased in 2016

Total: 403 TB 93% used (27 TB free)

Farnam

4 TB default allocation

90 TB purchased in 2014

276 TB purchased in 2017

757 TB purchased in 2018

Total: 1127 TB 83% used (193 TB free)

Actual CPU Usage

Grace

Grace Shared 258,948 h (equivalent to ~120 cores at 100% utilization)

Grace Dedicated 371,982 h (equivalent to ~175 cores at 100% utilization)

Grace Scavenge 362,890 h (equivalent to ~165 cores at 100% utilization)

Grace Total 993,820 h (~462 cores but own 672)

Farnam

Farnam Shared 108,789 h (equivalent to ~50 cores at 100% utilization)

Farnam Dedicated 262,642 h (equivalent to ~120 cores at 100% utilization)

Farnam Dedicated - GPU 13,250 h

Farnam Scavenge 29,527 h (equivalent to 13 cores at 100% utilization)

Farnam Total 414,208 h (~183 cores)

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