Papers Page Code
From GersteinInfo
(→Generate publication documents from SpreadSheet) |
(→Generate publication documents from SpreadSheet) |
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The tags can conceptually be divided into two groups: ones such as PMID and title, which serve to identify the paper, and tags such as website and subject which supply supplemental information about the paper. There are two ways to identify a paper (in order of decreasing precedence): | The tags can conceptually be divided into two groups: ones such as PMID and title, which serve to identify the paper, and tags such as website and subject which supply supplemental information about the paper. There are two ways to identify a paper (in order of decreasing precedence): | ||
| - | PMID | + | PMID<br \> |
title, citation | title, citation | ||
Revision as of 10:14, 16 September 2011
Contents |
Generate publication documents from SpreadSheet
- "Papers Page" is generated from two google spreadsheets, "Papers Master" and "Papers Subjects". "Papers Master" stores basic information about each paper. "Papers Subjects" stores information about each grant.
Here is a list of the tags and their meanings:
Papers Master: <labid> - id by which to refer to the article <PMID> - PubMed id <title> - title of the article <citation> - citation of the article (author, journal, year, etc) <preprint> - URL of the preprint file <subjects> - specifies the grant(s) funding the paper (e.g. "cegs,keck") <website> - supplemental website <Year> - year the article was published <footnote> - additional information <website2> - second supplemental website
The tags can conceptually be divided into two groups: ones such as PMID and title, which serve to identify the paper, and tags such as website and subject which supply supplemental information about the paper. There are two ways to identify a paper (in order of decreasing precedence):
PMID
title, citation
You should always include the PMID if a paper is known to be listed in PubMed. Option 2 should be used for papers that are in press.
The other group of tags supplies additional information about the paper specified by the first group of tags. All of these tags are optional, however used of <subjects> and <preprint> is strongly encouraged. (Please consult Mark for guidelines on citing grants.)
| labid | PMID | title | citation | preprint | subject | website | Year | footnote | website2 | |
|---|---|---|---|---|---|---|---|---|---|---|
| metamembrane | 20430783 | http://archive.gersteinlab.org/papers/e-print/metamembrane/preprint.pdf | interactions | http://metagenomics.gersteinlab.org/membrane | 2010 |
Papers Subjects: <category> - classification of grants <labid> - name refer to each grant <title> - description of each grant <website> - external website <html> - additional information
Here is a snapshot from "Papers Page" & "Papers Subjects":
| labid | PMID | title | citation | preprint | subject | website | Year | footnote | website2 | |
|---|---|---|---|---|---|---|---|---|---|---|
| metamembrane | 20430783 | http://archive.gersteinlab.org/papers/e-print/metamembrane/preprint.pdf | interactions | http://metagenomics.gersteinlab.org/membrane | 2010 |
Automatic generation of publication documents from SpreadSheet
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http://wiki.gersteinlab.org/labinfo/Papers_Page_Documentation
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