View source for Analysis of Lab Publications

==Overview==

Below is quick analysis of lab publication patterns, showing our websites and most commonly picked journals. 

Raw data is in :

[http://archive.gersteinlab.org/docs/2010/05.09/Analysis-of-Journals-and-Websites-from-PapersPage-9May2010.xls Analysis-of-Journals-and-Websites-from-PapersPage-9May2010] uploaded by MG on 9 May '10 

which is derived from:

http://papers.gersteinlab.org/papers/papers-ids.htm

==Websites==
150 Unique websites associated with lab papers 
(from papers.gersteinlab.org as of 9-May-2010)

    http://archive.gersteinlab.org/proj/ReSeqSim/
    http://array.mbb.yale.edu/chr22
    http://array.mbb.yale.edu/chr22/STAT/
    http://array.mbb.yale.edu/yeast/transcription/
    http://bioinfo.mbb.yale.edu/align/
    http://bioinfo.mbb.yale.edu/align/scop
    http://bioinfo.mbb.yale.edu/expression
    http://bioinfo.mbb.yale.edu/expression/codons
    http://bioinfo.mbb.yale.edu/expression/echipchip
    http://bioinfo.mbb.yale.edu/expression/interactions
    http://bioinfo.mbb.yale.edu/expression/myelopoiesis
    http://bioinfo.mbb.yale.edu/expression/neutrophil
    http://bioinfo.mbb.yale.edu/expression/prot-v-mrna
    http://bioinfo.mbb.yale.edu/expressyourself
    http://bioinfo.mbb.yale.edu/genome
    http://bioinfo.mbb.yale.edu/genome/browser
    http://bioinfo.mbb.yale.edu/genome/expression
    http://bioinfo.mbb.yale.edu/genome/foldfunc/
    http://bioinfo.mbb.yale.edu/genome/integrate/interactions/assess/
    http://bioinfo.mbb.yale.edu/genome/localize
    http://bioinfo.mbb.yale.edu/genome/MG
    http://bioinfo.mbb.yale.edu/genome/phenotypes
    http://bioinfo.mbb.yale.edu/genome/pseudogene/
    http://bioinfo.mbb.yale.edu/genome/pseudogene/human-cyc
    http://bioinfo.mbb.yale.edu/genome/pseudogene/motif/
    http://bioinfo.mbb.yale.edu/genome/thermophile
    http://bioinfo.mbb.yale.edu/genome/tms
    http://bioinfo.mbb.yale.edu/genome/trees
    http://bioinfo.mbb.yale.edu/genome/worm
    http://bioinfo.mbb.yale.edu/genome/worm/pseudogene
    http://bioinfo.mbb.yale.edu/genome/yeast/chip
    http://bioinfo.mbb.yale.edu/genome/yeast/orfome
    http://bioinfo.mbb.yale.edu/geometry
    http://bioinfo.mbb.yale.edu/hyper/mbg/AvgCore/
    http://bioinfo.mbb.yale.edu/hyper/mbg/AvgCore/ismb96/
    http://bioinfo.mbb.yale.edu/hyper/mbg/CoarseSurf/
    http://bioinfo.mbb.yale.edu/hyper/mbg/ISMB-94-60/
    http://bioinfo.mbb.yale.edu/hyper/mbg/Purcell/
    http://bioinfo.mbb.yale.edu/hyper/mbg/SurfaceVolumes/
    http://bioinfo.mbb.yale.edu/labdb/datamine
    http://bioinfo.mbb.yale.edu/MolMovDB
    http://bioinfo.mbb.yale.edu/MolMovDB/geometry/membrane
    http://bioinfo.mbb.yale.edu/network/essen
    http://bioinfo.mbb.yale.edu/proteinchip
    http://bioinfo.mbb.yale.edu/regulation/TIG
    http://bioinfo.mbb.yale.edu/tmstat/
    http://bioinfo.mbb.yale.edu/what-is-it
    http://breakptr.gersteinlab.org
    http://coevolution.gersteinlab.org/coevolution/
    http://DART.gersteinlab.org
    http://dart.gersteinlab.org/ENCODE/TR/
    http://dart.gersteinlab.org/rice/
    http://encode.gersteinlab.org
    http://genecensus.org
    http://genecensus.org/20
    http://genecensus.org/expression/cluster
    http://genecensus.org/expression/interactions
    http://genecensus.org/expression/translatome
    http://genecensus.org/integrate/interactions
    http://genecensus.org/intint
    http://genecensus.org/localize
    http://genecensus.org/pseudogene
    http://genecensus.org/TopNet
    http://genecensus.org/yeast/orfome/new-genes
    http://geometry.molmovdb.org/3v/
    http://geometry.molmovdb.org/NucProt/
    http://helix.gersteinlab.org
    http://hub.gersteinlab.org/
    http://hub.gersteinlab.org/ir-supp
    http://interolog.gersteinlab.org/
    http://mining.nesg.org
    http://modencode.org
    http://molmovdb.org
    http://molmovdb.org/cgi-bin/submit-flexoracle.cgi
    http://molmovdb.org/cosb/
    http://molmovdb.org/geometry/3dhmm
    http://molmovdb.org/HAG/
    http://molmovdb.org/molmovdb/cocb
    http://molmovdb.org/nma/
    http://ndbserver.rutgers.edu/NDB/archives
    http://nesg.org
    http://networks.gersteinlab.org/intint/
    http://networks.gersteinlab.org/metagenomics
    http://networks.gersteinlab.org/network/netcomp/
    http://networks.gersteinlab.org/phosphorylome
    http://networks.gersteinlab.org/tse/
    http://networks.gersteinlab.org/tyna/
    http://papers.gersteinlab.org/e-print/amsci
    http://papers.gersteinlab.org/e-print/dbcopyright/extra/web/index.html
    http://papers.gersteinlab.org/e-print/sciam2/
    http://partslist.org
    http://partslist.org/func
    http://partslist.org/powerlaw
    http://plants.gersteinlab.org/
    http://prokaryotes.pseudogene.org/
    http://proteomics.gersteinlab.org
    http://pseudofam.pseudogene.org
    http://pseudogene.org
    http://pseudogene.org/ENCODE
    http://pseudogene.org/glycolysis/
    http://pseudogene.org/nr/
    http://pseudogene.org/polyo
    http://pseudogene.org/pseudoPipeD/index.html
    http://pubnet.gersteinlab.org/
    http://pubnet.gersteinlab.org/rnai/
    http://purelight.biology.yale.edu:8080/servlets-examples/procat.html
    http://sandy.topnet.gersteinlab.org/
    http://sin.gersteinlab.org
    http://spine.mbb.yale.edu/deletion/
    http://stonehinge.molmovdb.org
    http://sv.gersteinlab.org
    http://sv.gersteinlab.org/breakseq/
    http://tilescope.gersteinlab.org
    http://tiling.gersteinlab.org
    http://tiling.gersteinlab.org/hmm/
    http://tiling.gersteinlab.org/platformcmp/
    http://tiling.gersteinlab.org/pseudomedian/
    http://tiling.gersteinlab.org/sequence_effects/
    http://topnet.gersteinlab.org/clique/
    http://transcriptome.gersteinlab.org/
    http://wiki.gersteinlab.org/pubinfo/Ortholog_Resources
    http://wiki.gersteinlab.org/pubinfo/What_is_a_gene
    http://www-smi.stanford.edu/projects/helix/LPFC
    http://www.cbio.mskcc.org/~jansen/comb/
    http://www.cs.concordia.ca/~baker/SW-RKDLS-May-2006.htm
    http://www.dis.uniroma1.it/~algo02
    http://www.elsevier.com/inca/publications/store/4/0/8/?menu=cont&label=Table
    http://www.gersteinlab.org/proj/BoCaTFBS/
    http://www.gersteinlab.org/proj/bottleneck/
    http://www.gersteinlab.org/proj/chip-seq-simu/
    http://www.gersteinlab.org/proj/funcsim/
    http://www.gersteinlab.org/proj/funnygene/
    http://www.gersteinlab.org/proj/gpcrsnp
    http://www.gersteinlab.org/proj/microrna
    http://www.gersteinlab.org/proj/nethierarchy/
    http://www.gersteinlab.org/proj/netpossel/
    http://www.gersteinlab.org/proj/PeakSeq
    http://www.gersteinlab.org/proj/phenome/
    http://www.gersteinlab.org/proj/predess
    http://www.gersteinlab.org/proj/regnetdiverge
    http://www.gersteinlab.org/proj/sdcnvcorr/
    http://www.med.yale.edu/microarray
    http://www.nature.com/nature/debates/e-access
    http://www.nature.com/nsb/structural_genomics
    http://www.pseudogene.org/indel-nar/
    http://www.pseudogene.org/ribosomal-protein
    http://www.the-scientist.com/2006/9/1/25/1/
    http://www2.molmovdb.org/wiki/info/index.php/Protein_Packing
    http://yeasthub.gersteinlab.org
    http://zerlina.ingentaselect.com/vl=9024539/cl=83/nw=1/rpsv/cw/mal/10665277/v11n4/contp1-1.htm

==Journals==
Number of lab publications in 67 Journals 	
(from papers.gersteinlab.org as of 9-May-2010)	

    	27	Genome Res
    	27	J Mol Biol
    	27	Nucleic Acids Res
    	19	Genome Biol
    	17	Bioinformatics
    	17	Science
    	16	Proc Natl Acad Sci U S A
    	13	Nature
    	12	Genes Dev
    	10	PLoS Comput Biol
    	10	Proteins
    	9	BMC Bioinformatics
    	8	BMC Genomics
    	7	Nat Biotechnol
    	7	Trends Genet
    	6	Curr Opin Struct Biol
    	6	Protein Sci
    	4	Blood
    	4	Protein Eng
    	3	Methods Enzymol
    	3	PLoS One
    	2	Am J Bioeth
    	2	Annu Rev Biochem
    	2	Cell
    	2	Cold Spring Harb Symp Quant Biol
    	2	Curr Opin Chem Biol
    	2	Dev Cell
    	2	FEBS Lett
    	2	Funct Integr Genomics
    	2	J Mol Evol
    	2	Mol Cell Proteomics
    	2	Mol Syst Biol
    	2	Nat Struct Biol
    	2	Proc Int Conf Intell Syst Mol Biol
    	2	Sci Am
    	1	Biochemistry
    	1	Biotechniques
    	1	Comput Appl Biosci
    	1	Curr Opin Genet Dev
    	1	Curr Opin Microbiol
    	1	Drug Discov Today
    	1	EMBO J
    	1	Eukaryot Cell
    	1	FEMS Microbiol Rev
    	1	Fold Des
    	1	J Mol Graph
    	1	J Mol Microbiol Biotechnol
    	1	J Physiol
    	1	J Proteome Res
    	1	J Struct Funct Genomics
    	1	J Virol
    	1	Methods Inf Med
    	1	Mol Biol Evol
    	1	N Engl J Med
    	1	Neoplasia
    	1	Pac Symp Biocomput
    	1	Pharmacogenomics
    	1	Pharmacogenomics J
    	1	Plant Mol Biol
    	1	Plant Physiol
    	1	PLoS Genet
    	1	Proc AMIA Symp
    	1	Prog Biophys Mol Biol
    	1	Q Rev Biophys
    	1	Sci Signal
    	1	Structure
    	1	Trends Biochem Sci