Analysis of Lab Publications
From GersteinInfo
Overview
Below is quick analysis of lab publication patterns, showing our websites and most commonly picked journals.
Raw data is in :
Analysis-of-Journals-and-Websites-from-PapersPage-9May2010 uploaded by MG on 9 May '10
which is derived from:
http://papers.gersteinlab.org/papers/papers-ids.htm
Websites
150 Unique websites associated with lab papers (from papers.gersteinlab.org as of 9-May-2010)
http://archive.gersteinlab.org/proj/ReSeqSim/ http://array.mbb.yale.edu/chr22 http://array.mbb.yale.edu/chr22/STAT/ http://array.mbb.yale.edu/yeast/transcription/ http://bioinfo.mbb.yale.edu/align/ http://bioinfo.mbb.yale.edu/align/scop http://bioinfo.mbb.yale.edu/expression http://bioinfo.mbb.yale.edu/expression/codons http://bioinfo.mbb.yale.edu/expression/echipchip http://bioinfo.mbb.yale.edu/expression/interactions http://bioinfo.mbb.yale.edu/expression/myelopoiesis http://bioinfo.mbb.yale.edu/expression/neutrophil http://bioinfo.mbb.yale.edu/expression/prot-v-mrna http://bioinfo.mbb.yale.edu/expressyourself http://bioinfo.mbb.yale.edu/genome http://bioinfo.mbb.yale.edu/genome/browser http://bioinfo.mbb.yale.edu/genome/expression http://bioinfo.mbb.yale.edu/genome/foldfunc/ http://bioinfo.mbb.yale.edu/genome/integrate/interactions/assess/ http://bioinfo.mbb.yale.edu/genome/localize http://bioinfo.mbb.yale.edu/genome/MG http://bioinfo.mbb.yale.edu/genome/phenotypes http://bioinfo.mbb.yale.edu/genome/pseudogene/ http://bioinfo.mbb.yale.edu/genome/pseudogene/human-cyc http://bioinfo.mbb.yale.edu/genome/pseudogene/motif/ http://bioinfo.mbb.yale.edu/genome/thermophile http://bioinfo.mbb.yale.edu/genome/tms http://bioinfo.mbb.yale.edu/genome/trees http://bioinfo.mbb.yale.edu/genome/worm http://bioinfo.mbb.yale.edu/genome/worm/pseudogene http://bioinfo.mbb.yale.edu/genome/yeast/chip http://bioinfo.mbb.yale.edu/genome/yeast/orfome http://bioinfo.mbb.yale.edu/geometry http://bioinfo.mbb.yale.edu/hyper/mbg/AvgCore/ http://bioinfo.mbb.yale.edu/hyper/mbg/AvgCore/ismb96/ http://bioinfo.mbb.yale.edu/hyper/mbg/CoarseSurf/ http://bioinfo.mbb.yale.edu/hyper/mbg/ISMB-94-60/ http://bioinfo.mbb.yale.edu/hyper/mbg/Purcell/ http://bioinfo.mbb.yale.edu/hyper/mbg/SurfaceVolumes/ http://bioinfo.mbb.yale.edu/labdb/datamine http://bioinfo.mbb.yale.edu/MolMovDB http://bioinfo.mbb.yale.edu/MolMovDB/geometry/membrane http://bioinfo.mbb.yale.edu/network/essen http://bioinfo.mbb.yale.edu/proteinchip http://bioinfo.mbb.yale.edu/regulation/TIG http://bioinfo.mbb.yale.edu/tmstat/ http://bioinfo.mbb.yale.edu/what-is-it http://breakptr.gersteinlab.org http://coevolution.gersteinlab.org/coevolution/ http://DART.gersteinlab.org http://dart.gersteinlab.org/ENCODE/TR/ http://dart.gersteinlab.org/rice/ http://encode.gersteinlab.org http://genecensus.org http://genecensus.org/20 http://genecensus.org/expression/cluster http://genecensus.org/expression/interactions http://genecensus.org/expression/translatome http://genecensus.org/integrate/interactions http://genecensus.org/intint http://genecensus.org/localize http://genecensus.org/pseudogene http://genecensus.org/TopNet http://genecensus.org/yeast/orfome/new-genes http://geometry.molmovdb.org/3v/ http://geometry.molmovdb.org/NucProt/ http://helix.gersteinlab.org http://hub.gersteinlab.org/ http://hub.gersteinlab.org/ir-supp http://interolog.gersteinlab.org/ http://mining.nesg.org http://modencode.org http://molmovdb.org http://molmovdb.org/cgi-bin/submit-flexoracle.cgi http://molmovdb.org/cosb/ http://molmovdb.org/geometry/3dhmm http://molmovdb.org/HAG/ http://molmovdb.org/molmovdb/cocb http://molmovdb.org/nma/ http://ndbserver.rutgers.edu/NDB/archives http://nesg.org http://networks.gersteinlab.org/intint/ http://networks.gersteinlab.org/metagenomics http://networks.gersteinlab.org/network/netcomp/ http://networks.gersteinlab.org/phosphorylome http://networks.gersteinlab.org/tse/ http://networks.gersteinlab.org/tyna/ http://papers.gersteinlab.org/e-print/amsci http://papers.gersteinlab.org/e-print/dbcopyright/extra/web/index.html http://papers.gersteinlab.org/e-print/sciam2/ http://partslist.org http://partslist.org/func http://partslist.org/powerlaw http://plants.gersteinlab.org/ http://prokaryotes.pseudogene.org/ http://proteomics.gersteinlab.org http://pseudofam.pseudogene.org http://pseudogene.org http://pseudogene.org/ENCODE http://pseudogene.org/glycolysis/ http://pseudogene.org/nr/ http://pseudogene.org/polyo http://pseudogene.org/pseudoPipeD/index.html http://pubnet.gersteinlab.org/ http://pubnet.gersteinlab.org/rnai/ http://purelight.biology.yale.edu:8080/servlets-examples/procat.html http://sandy.topnet.gersteinlab.org/ http://sin.gersteinlab.org http://spine.mbb.yale.edu/deletion/ http://stonehinge.molmovdb.org http://sv.gersteinlab.org http://sv.gersteinlab.org/breakseq/ http://tilescope.gersteinlab.org http://tiling.gersteinlab.org http://tiling.gersteinlab.org/hmm/ http://tiling.gersteinlab.org/platformcmp/ http://tiling.gersteinlab.org/pseudomedian/ http://tiling.gersteinlab.org/sequence_effects/ http://topnet.gersteinlab.org/clique/ http://transcriptome.gersteinlab.org/ http://wiki.gersteinlab.org/pubinfo/Ortholog_Resources http://wiki.gersteinlab.org/pubinfo/What_is_a_gene http://www-smi.stanford.edu/projects/helix/LPFC http://www.cbio.mskcc.org/~jansen/comb/ http://www.cs.concordia.ca/~baker/SW-RKDLS-May-2006.htm http://www.dis.uniroma1.it/~algo02 http://www.elsevier.com/inca/publications/store/4/0/8/?menu=cont&label=Table http://www.gersteinlab.org/proj/BoCaTFBS/ http://www.gersteinlab.org/proj/bottleneck/ http://www.gersteinlab.org/proj/chip-seq-simu/ http://www.gersteinlab.org/proj/funcsim/ http://www.gersteinlab.org/proj/funnygene/ http://www.gersteinlab.org/proj/gpcrsnp http://www.gersteinlab.org/proj/microrna http://www.gersteinlab.org/proj/nethierarchy/ http://www.gersteinlab.org/proj/netpossel/ http://www.gersteinlab.org/proj/PeakSeq http://www.gersteinlab.org/proj/phenome/ http://www.gersteinlab.org/proj/predess http://www.gersteinlab.org/proj/regnetdiverge http://www.gersteinlab.org/proj/sdcnvcorr/ http://www.med.yale.edu/microarray http://www.nature.com/nature/debates/e-access http://www.nature.com/nsb/structural_genomics http://www.pseudogene.org/indel-nar/ http://www.pseudogene.org/ribosomal-protein http://www.the-scientist.com/2006/9/1/25/1/ http://www2.molmovdb.org/wiki/info/index.php/Protein_Packing http://yeasthub.gersteinlab.org http://zerlina.ingentaselect.com/vl=9024539/cl=83/nw=1/rpsv/cw/mal/10665277/v11n4/contp1-1.htm
Journals
Number of lab publications in 67 Journals (from papers.gersteinlab.org as of 9-May-2010)
27 Genome Res 27 J Mol Biol 27 Nucleic Acids Res 19 Genome Biol 17 Bioinformatics 17 Science 16 Proc Natl Acad Sci U S A 13 Nature 12 Genes Dev 10 PLoS Comput Biol 10 Proteins 9 BMC Bioinformatics 8 BMC Genomics 7 Nat Biotechnol 7 Trends Genet 6 Curr Opin Struct Biol 6 Protein Sci 4 Blood 4 Protein Eng 3 Methods Enzymol 3 PLoS One 2 Am J Bioeth 2 Annu Rev Biochem 2 Cell 2 Cold Spring Harb Symp Quant Biol 2 Curr Opin Chem Biol 2 Dev Cell 2 FEBS Lett 2 Funct Integr Genomics 2 J Mol Evol 2 Mol Cell Proteomics 2 Mol Syst Biol 2 Nat Struct Biol 2 Proc Int Conf Intell Syst Mol Biol 2 Sci Am 1 Biochemistry 1 Biotechniques 1 Comput Appl Biosci 1 Curr Opin Genet Dev 1 Curr Opin Microbiol 1 Drug Discov Today 1 EMBO J 1 Eukaryot Cell 1 FEMS Microbiol Rev 1 Fold Des 1 J Mol Graph 1 J Mol Microbiol Biotechnol 1 J Physiol 1 J Proteome Res 1 J Struct Funct Genomics 1 J Virol 1 Methods Inf Med 1 Mol Biol Evol 1 N Engl J Med 1 Neoplasia 1 Pac Symp Biocomput 1 Pharmacogenomics 1 Pharmacogenomics J 1 Plant Mol Biol 1 Plant Physiol 1 PLoS Genet 1 Proc AMIA Symp 1 Prog Biophys Mol Biol 1 Q Rev Biophys 1 Sci Signal 1 Structure 1 Trends Biochem Sci
