RSEQtools/code

From GersteinInfo

RSEQtools Main Page

Code

Required Software - External

1. GSL - GNU Scientific Library
2. BlatSuite - BLAT and a collection of utility programs. Note these executables have to be part of the PATH.

Download

RSEQtools consists of two libraries: BIOS, which is a general C library, and MRF (Mapped Read Format), which contains a set of modules to analyze RNA-Seq data sets.

Source code

A TAR ball that contains the source code for these two components can be downloaded here:

• RSEQtools-0.6.tar.gz - Last updated on 11/05/2010
• RSEQtools-0.5.tar.gz - Initial upload

Executables

Statically built binaries for UNIX and Mac OS can be found here:

• RSEQtools-0.6_UNIX.tar.gz - 64bit version, last updated on 11/05/2010
• RSEQtools-0.6_MacOs_10.6.tar.gz - MacOs 10.6, last updated on 11/05/2010

Installation

The components should be installed in the same order as listed above. Installation instructions can be found at the respective website.

Important Note
==============

THIS PACKAGE (RSEQtools including BIOS and MRF) IS PROVIDED "AS IS" AND WITHOUT ANY EXPRESSED OR IMPLIED
WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED WARRANTIES
OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.

License information

The software package is released under the Creative Commons license (Attribution-NonCommerical).
For more details please refer to the Permissions Page on the Gerstein Lab webpage.