Papers Page Code

From GersteinInfo

Revision as of 10:10, 16 September 2011 by Public (Talk | contribs)

(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)

Generate publication documents from SpreadSheet

"Papers Page" is generated from two google spreadsheets, "Papers Master" and "Papers Subjects". "Papers Master" stores basic information about each paper. "Papers Subjects" stores information about each grant.

Here is a list of the tags and their meanings:

Papers Master:
<labid> - id by which to refer to the article
<PMID> - PubMed id
<title> - title of the article
<citation> - citation of the article (author, journal, year, etc)
<preprint> - URL of the preprint file
<subjects> - specifies the grant(s) funding the paper (e.g. "cegs,keck")
<website> - supplemental website
<Year> - year the article was published
<footnote> - additional information
<website2> - second supplemental website

There are two ways to identify a paper: 1. PubMed id 2.title, citation. You should always include the PMID if a paper is known to be listed in PubMed. Option 2 should be used for papers that are in press.

labid	PMID	title	citation	preprint	subject	website	Year	footnote	website2
metamembrane	20430783			http://archive.gersteinlab.org/papers/e-print/metamembrane/preprint.pdf	interactions	http://metagenomics.gersteinlab.org/membrane	2010

Papers Subjects:
<category> - classification of grants
<labid> - name refer to each grant
<title> - description of each grant
<website> - external website
<html> - additional information

Here is a snapshot from "Papers Page" & "Papers Subjects":

labid	PMID	title	citation	preprint	subject	website	Year	footnote	website2
metamembrane	20430783			http://archive.gersteinlab.org/papers/e-print/metamembrane/preprint.pdf	interactions	http://metagenomics.gersteinlab.org/membrane	2010