RSEQtools/code
From GersteinInfo
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| - | THIS PACKAGE (RSEQtools including BIOS and MRF) IS PROVIDED "AS IS" AND WITHOUT ANY | + | THIS PACKAGE (RSEQtools including BIOS and MRF) IS PROVIDED "AS IS" AND WITHOUT ANY EXPRESSED OR IMPLIED |
WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED WARRANTIES | WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED WARRANTIES | ||
| - | OF | + | OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. |
</pre> | </pre> | ||
Also, consult the [http://www.gersteinlab.org/misc/permissions.html Permissions Page] on the Gerstein Lab webpage. | Also, consult the [http://www.gersteinlab.org/misc/permissions.html Permissions Page] on the Gerstein Lab webpage. | ||
Revision as of 12:04, 19 August 2010
Code
Required Software - External
- GSL - GNU Scientific Library
- BlatSuite - BLAT and a collection of utility programs. Note these executables have to be part of the PATH.
Download
RSEQtools consists of two libraries: BIOS, which is a general C library, and MRF (Mapped Read Format), which contains a set of modules to analyze RNA-Seq data sets.
A TAR ball that contains these two components can be downloaded HERE.
Also, the source code can also be obtained from SourceForge.net.
Installation
The components should be installed in the same order as listed above. Installation instructions can be found at the respective website.
Important Note ============== THIS PACKAGE (RSEQtools including BIOS and MRF) IS PROVIDED "AS IS" AND WITHOUT ANY EXPRESSED OR IMPLIED WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
Also, consult the Permissions Page on the Gerstein Lab webpage.
