FusionSeq
From GersteinInfo
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<center>[http://rnaseq.gersteinlab.org/fusionseq/ FusionSeq main web page]</center> | <center>[http://rnaseq.gersteinlab.org/fusionseq/ FusionSeq main web page]</center> | ||
| - | + | This document provides the information for downloading, installing, compile and run FusionSeq. Please note that these tools were tested on a multi-node cluster of computing nodes with Linux Red Hat as operating system and PBS as scheduler system. FusionSeq programs are written in C and should likely compile to most Unix/Linux platforms. We used the gcc complier (version 3.4.6 20060404) to compile the source code. | |
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However, this is not a plug-and-play program, but it requires the user to compile, install and run a set of programs. Please read the [[Requirements|requirements]] before [[#Download|downloading]] FusionSeq. | However, this is not a plug-and-play program, but it requires the user to compile, install and run a set of programs. Please read the [[Requirements|requirements]] before [[#Download|downloading]] FusionSeq. | ||
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| - | =[[ | + | ==[[Requirements]]== |
| + | List of required programs and data. Please read this section before downloading FusionSeq. | ||
| - | =[[ | + | ==[[Download]]== |
| + | Links to FusionSeq source code and data sets. | ||
| - | + | ==[[Installation and Configuration of FusionSeq]]== | |
| + | Instructions to install and configure FusionSeq. | ||
| + | |||
| + | ==[[How to execute FusionSeq]]== | ||
| + | An example workflow of FusionSeq. | ||
Revision as of 14:38, 19 August 2010
This document provides the information for downloading, installing, compile and run FusionSeq. Please note that these tools were tested on a multi-node cluster of computing nodes with Linux Red Hat as operating system and PBS as scheduler system. FusionSeq programs are written in C and should likely compile to most Unix/Linux platforms. We used the gcc complier (version 3.4.6 20060404) to compile the source code. However, this is not a plug-and-play program, but it requires the user to compile, install and run a set of programs. Please read the requirements before downloading FusionSeq.
Contents |
Requirements
List of required programs and data. Please read this section before downloading FusionSeq.
Download
Links to FusionSeq source code and data sets.
Installation and Configuration of FusionSeq
Instructions to install and configure FusionSeq.
How to execute FusionSeq
An example workflow of FusionSeq.
