Prosnp: Difference between revisions
From GersteinInfo
Jump to navigationJump to search
No edit summary |
|||
| Line 2: | Line 2: | ||
Omega (dN/dS) values for all coding sites in Gencodev3b computed from 28 whole-genome vertebrate alignments using PAML. | Omega (dN/dS) values for all coding sites in Gencodev3b computed from 28 whole-genome vertebrate alignments using PAML. | ||
[http://archive.gersteinlab.org/prosnp/ omega values for all codons] | [http://archive.gersteinlab.org/prosnp/all_omega omega values for all codons] | ||
Omega values for sites identified as being under positive selection in humans relative to vertebrates (omega > 1 and probability (omega>1) > 0.5) | |||
[http://archive.gersteinlab.org/prosnp/omega_pos_sel Codons under positive selection] | |||
Revision as of 20:18, 3 August 2011
Data from "Consistent negative selection constraints at protein-coding sites across broad evolutionary time-scales" by Khurana et al
Omega (dN/dS) values for all coding sites in Gencodev3b computed from 28 whole-genome vertebrate alignments using PAML. omega values for all codons
Omega values for sites identified as being under positive selection in humans relative to vertebrates (omega > 1 and probability (omega>1) > 0.5) Codons under positive selection
