NCVAR
From GersteinInfo
(Difference between revisions)
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c-Jun Yale TFBS Regulation K562 [http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeYaleChIPseq/wgEncodeYaleChIPseqPeaksK562CjunV2.narrowPeak.gz wgEncodeYaleChIPseqPeaksK562CjunV2] | c-Jun Yale TFBS Regulation K562 [http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeYaleChIPseq/wgEncodeYaleChIPseqPeaksK562CjunV2.narrowPeak.gz wgEncodeYaleChIPseqPeaksK562CjunV2] | ||
JunD Yale TFBS Regulation K562 [http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeYaleChIPseq/wgEncodeYaleChIPseqPeaksK562JundV2.narrowPeak.gz wgEncodeYaleChIPseqPeaksK562JundV2] | JunD Yale TFBS Regulation K562 [http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeYaleChIPseq/wgEncodeYaleChIPseqPeaksK562JundV2.narrowPeak.gz wgEncodeYaleChIPseqPeaksK562JundV2] | ||
| - | PolII | + | PolII Yale TFBS Regulation GM12878 [http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeYaleChIPseq/wgEncodeYaleChIPseqPeaksGm12878Pol2V2.narrowPeak.gz wgEncodeYaleChIPseqPeaksGm12878Pol2V2] |
| - | DNase | + | DNase Open Chromatin Regulation GM12878 [http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeChromatinMap/wgEncodeDukeDNaseSeqPeaksGm12878V3.narrowPeak.gz wgEncodeDukeDNaseSeqPeaksGm12878V3] |
Revision as of 15:27, 19 April 2011
Specificity of TF-binding sites and the DNase sites files downloaded from the UCSC genome browser
TF motif track group cell line link CTCF Open Chromatin Regulation GM12878 wgEncodeUtaChIPseqPeaksGm12878CtcfV3 STAT1 Yale TFBS Regulation Hela-S3 (IFNr 30min) wgEncodeYaleChIPseqPeaksHelas3ifngStat1 NFkB Yale TFBS Regulation GM12878 wgEncodeYaleChIPseqPeaksGm12878NfkbTnfa c-Myc Yale TFBS Regulation K562 wgEncodeYaleChIPseqPeaksK562CmycV2 c-Fos Yale TFBS Regulation K562 wgEncodeYaleChIPseqPeaksK562CfosV2 c-Jun Yale TFBS Regulation K562 wgEncodeYaleChIPseqPeaksK562CjunV2 JunD Yale TFBS Regulation K562 wgEncodeYaleChIPseqPeaksK562JundV2 PolII Yale TFBS Regulation GM12878 wgEncodeYaleChIPseqPeaksGm12878Pol2V2 DNase Open Chromatin Regulation GM12878 wgEncodeDukeDNaseSeqPeaksGm12878V3
