NCVAR
From GersteinInfo
(Difference between revisions)
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CTCF Open Chromatin Regulation GM12878 [http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeChromatinMap/wgEncodeUtaChIPseqPeaksGm12878CtcfV3.narrowPeak.gz download] | CTCF Open Chromatin Regulation GM12878 [http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeChromatinMap/wgEncodeUtaChIPseqPeaksGm12878CtcfV3.narrowPeak.gz download] | ||
STAT1 Yale TFBS Regulation Hela-S3 (IFNr 30min) [http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeYaleChIPseq/wgEncodeYaleChIPseqPeaksHelas3ifngStat1.narrowPeak.gz download] | STAT1 Yale TFBS Regulation Hela-S3 (IFNr 30min) [http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeYaleChIPseq/wgEncodeYaleChIPseqPeaksHelas3ifngStat1.narrowPeak.gz download] | ||
| - | NFkB Yale TFBS Regulation GM12878 [http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeYaleChIPseq/wgEncodeYaleChIPseqPeaksGm12878NfkbTnfa.narrowPeak.gz download] | + | NFkB Yale TFBS Regulation GM12878 [http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeYaleChIPseq/wgEncodeYaleChIPseqPeaksGm12878NfkbTnfa.narrowPeak.gz download] |
| - | c-Myc Yale TFBS Regulation K562 [http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeYaleChIPseq/wgEncodeYaleChIPseqPeaksK562CmycV2.narrowPeak.gz download] | + | c-Myc Yale TFBS Regulation K562 [http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeYaleChIPseq/wgEncodeYaleChIPseqPeaksK562CmycV2.narrowPeak.gz download] |
| - | c-Fos Yale TFBS Regulation K562 [http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeYaleChIPseq/wgEncodeYaleChIPseqPeaksK562CfosV2.narrowPeak.gz download] | + | c-Fos Yale TFBS Regulation K562 [http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeYaleChIPseq/wgEncodeYaleChIPseqPeaksK562CfosV2.narrowPeak.gz download] |
| - | c-Jun Yale TFBS Regulation K562 [http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeYaleChIPseq/wgEncodeYaleChIPseqPeaksK562CjunV2.narrowPeak.gz download] | + | c-Jun Yale TFBS Regulation K562 [http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeYaleChIPseq/wgEncodeYaleChIPseqPeaksK562CjunV2.narrowPeak.gz download] |
| - | JunD Yale TFBS Regulation K562 [http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeYaleChIPseq/wgEncodeYaleChIPseqPeaksK562JundV2.narrowPeak.gz download] | + | JunD Yale TFBS Regulation K562 [http://hgdownload.cse.ucsc.edu/goldenPath/hg18/encodeDCC/wgEncodeYaleChIPseq/wgEncodeYaleChIPseqPeaksK562JundV2.narrowPeak.gz download] |
| - | PolII | + | PolII |
| - | DNase | + | DNase |
Revision as of 14:58, 19 April 2011
Specificity of TF-binding sites and the DNase sites files downloaded from the UCSC genome browser
TF motif track group cell line link CTCF Open Chromatin Regulation GM12878 download STAT1 Yale TFBS Regulation Hela-S3 (IFNr 30min) download NFkB Yale TFBS Regulation GM12878 download c-Myc Yale TFBS Regulation K562 download c-Fos Yale TFBS Regulation K562 download c-Jun Yale TFBS Regulation K562 download JunD Yale TFBS Regulation K562 download PolII DNase
