Other Papers
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(Created page with '==Other Writings (book chapters, popular articles, Op-Eds, miscellaneous)== * C Chothia & M Gerstein. (1992). "Protein Design for Domain Closure," in Muscle as a Machine: Energy…') |
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- | == | + | ==Opinion Pieces (Op-Eds)== |
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* D Greenbaum & M Gerstein (2008). [[Hartford_Courant_OpEd_from_Other_Papers_for_M_Gerstein|"Danger: Sharing Gene Data"]], ''Hartford Courant'', July 10, pg. A11 (oped) | * D Greenbaum & M Gerstein (2008). [[Hartford_Courant_OpEd_from_Other_Papers_for_M_Gerstein|"Danger: Sharing Gene Data"]], ''Hartford Courant'', July 10, pg. A11 (oped) | ||
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* M Seringhaus & M Gerstein (2009). [[Hartford_Courant_OpEd2_from_Other_Papers_for_M_Gerstein|"Putting too much information online can erode individual privacy"]], ''Hartford Courant'', June 5 (oped) | * M Seringhaus & M Gerstein (2009). [[Hartford_Courant_OpEd2_from_Other_Papers_for_M_Gerstein|"Putting too much information online can erode individual privacy"]], ''Hartford Courant'', June 5 (oped) | ||
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+ | * D Greenbaum & M Gerstein (2010). [[SF Chron OpEd2 from Other Papers for M Gerstein|"Exploring genetics of professional athletes"]], ''SF Chronicle'', May 2, Page E-4 (Insight) | ||
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+ | * D Greenbaum & M Gerstein (2012). [[WSJ OpEd from Other Papers for M Gerstein|"The Age of Genetically Optimized Sports"]], ''Wall Street Journal'', July 24, Page A13 (Opinion) | ||
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+ | * D Greenbaum & M Gerstein (2013). [[USA Today Oped from Other Papers for M Gerstein|"Your DNA vulnerable to snooping, too?"]], ''USA Today'', July 27 (Opinion) | ||
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+ | * D Greenbaum & M Gerstein (2015). [[SF Chron Oped on gcode from Other Papers for M Gerstein|"Too big to close down: Websites need regulation like utilities"]], ''SF Chronicle'', April 24 (Opinion) | ||
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+ | * D Greenbaum & M Gerstein (2015). [[SF Chron Oped on GINA from Other Papers for M Gerstein|"Why can employers fingerprint, but not test workers’ DNA?"]], ''SF Chronicle'', July 10 (Opinion) | ||
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+ | * D Greenbaum & M Gerstein (2016). [[SF Chron Oped on Geek Chic from Other Papers for M Gerstein|"Going beyond geek chic -- CeBIT"]], ''SF Chronicle'', March 10 (Opinion) | ||
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+ | * D Greenbaum & M Gerstein (2017). [[SF Chron Oped on Wearable Data from Other Papers for M Gerstein|"Pooling data from wearables could boost health benefits"]], ''SF Chronicle'', Feb. 24 (Opinion) | ||
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+ | * D Greenbaum & M Gerstein (2018). [[SF Chron Oped on Data Residue from Other Papers for M Gerstein|"Our smart devices must be made to forget us"]], ''SF Chronicle'', Oct. 18 (Opinion) | ||
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+ | * G Gursoy & M Gerstein (2020). [[Hartford Courant Oped on Molecular Privacy|"As coronavirus testing expands, new personal privacy issues arise"]], ''Hartford Courant'', July 19 (oped) | ||
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+ | * M Gerstein & J Peccia (2020). [[New Haven Register Oped on Aerosol Transmission of Coronavirus|"What secondhand smoke tells us about the coronavirus"]], ''New Haven Register'', Dec. 12 (Opinion) | ||
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+ | * M Gerstein & D Greenbaum (2021). [[JPost Oped on Data Science and polling|"Georgia Senate runoff: Using predictive analytics and big data properly"]], ''Jerusalem Post Opinion'', Jan. 6 (Opinion) | ||
==Letters to the Editor (in the Popular Press)== | ==Letters to the Editor (in the Popular Press)== | ||
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* D Greenbaum & M Gerstein (2009). [http://textstream.blogspot.com/2009/11/let-to-ed-re-your-genome-isnt-that.html "Can't run from DNA"], ''New Scientist'' (issue 2727, 23 Sept., pgs. 28-29) | * D Greenbaum & M Gerstein (2009). [http://textstream.blogspot.com/2009/11/let-to-ed-re-your-genome-isnt-that.html "Can't run from DNA"], ''New Scientist'' (issue 2727, 23 Sept., pgs. 28-29) | ||
- | * M Gerstein (2010). [http:// | + | * M Gerstein (2010). [http://blog.gerstein.info/2010/09/harness-dna-memory-letter-re-avoiding.html "Harness DNA Memory"], ''American Scientist'' (Mar.-Apr.) |
- | * D Greenbaum & M Gerstein (2010). [http:// | + | * D Greenbaum & M Gerstein (2010). [http://blog.gerstein.info/2010/09/testing-isnt-everything-letter-re.html "Testing Isn’t Everything"], ''NY Times'' (17 Apr.) |
- | * D Greenbaum & M Gerstein (2010). [http:// | + | * D Greenbaum & M Gerstein (2010). [http://blog.gerstein.info/2010/09/regulating-genome-letter-re-diagnosis.html "Regulating the Genome"], ''Forbes'' (26 Apr.) |
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+ | * D Greenbaum & M Gerstein (2010). [http://blog.gerstein.info/2010/10/thrills-and-traps-lurking-on-web-letter.html "Thrills and Traps, Lurking on the Web"], ''NY Times'' (12 May, pg. A24) | ||
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+ | * M Gerstein (2010). [http://blog.gerstein.info/2010/09/outlook-for-libraries-letter-re.html "The Outlook for Libraries"], ''Harvard Magazine'' (July-August issue) | ||
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+ | * D Greenbaum & M Gerstein (2010). [http://blog.gerstein.info/2010/10/concern-for-privacy-letter-re-dna.html "Concern for Privacy"], ''NY Times'' (17 Oct., pg. SP11) | ||
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+ | * D Greenbaum & M Gerstein (2011). [http://blog.gerstein.info/2011/07/benefits-of-snooping-letter-re-how-to.html "The Benefits of Snooping"], ''Tech Review'' (Jul.-Aug.) | ||
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+ | * D Greenbaum & M Gerstein (2011). [http://blog.gerstein.info/2011/11/sharing-too-much-online-letter-re-at.html "Sharing Too Much Online"], ''NY Times'' (7 Oct.) | ||
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+ | * M Gerstein (2013). [http://blog.gerstein.info/2013/07/cyberattacks-on-universities-and-how-to.html "Cyberattacks on Universities, and How to Thwart Them"], ''NY Times'' (24 Jul., pg A22) | ||
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+ | * M Gerstein (2014). [http://blog.gerstein.info/2014/05/getting-personal-letter-re-uniquely-me.html "Getting Personal"], ''American Scientist'' (May-Jun., vol. 12, pg. 163) | ||
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+ | * D Greenbaum & M Gerstein (2015). [http://blog.gerstein.info/2015/06/an-emerging-field-letter-re-cultures-of.html "An Emerging Field"], ''American Scientist'' (May-Jun., vol. 103, pg. 164) | ||
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+ | * M Gerstein (2015). [http://blog.gerstein.info/2015/12/the-full-monte-carlo-letter-re-programs.html "The Full Monte Carlo"], ''American Scientist'' (Nov-Dec., vol. 103, Num. 6, pg. 374) | ||
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+ | * D Greenbaum & M Gerstein (2016). [http://blog.gerstein.info/2016/11/a-cyberattack-medical-devices-letter-re.html "A Cyberattack & Medical Devices"], ''NY Times'' (2 Nov., Opinion Pages) | ||
==Recorded Panel Discussions & Interviews== | ==Recorded Panel Discussions & Interviews== | ||
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* [[Q2C_panel_from_Other_Papers_for_M_Gerstein|"Whose DNA is it?"]], a panel discussion on Personal Genomics, on the Agenda with Steve Paikin, as part of the Quantum to Cosmos Festival (Q2C) in Waterloo, ON, 21 Oct. 2009 | * [[Q2C_panel_from_Other_Papers_for_M_Gerstein|"Whose DNA is it?"]], a panel discussion on Personal Genomics, on the Agenda with Steve Paikin, as part of the Quantum to Cosmos Festival (Q2C) in Waterloo, ON, 21 Oct. 2009 | ||
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+ | * [[Fib_Podcast2_from_Other_Papers_for_M_Gerstein|"Genomics, Proteomics, Cellular Immunity, and Anti-Matter"]], a panel discussion moderated by M Pelletier, including V Racaniello, A Nantel, M Gerstein, and G Farr. ''Futures in Biotech'' 71 (22 Nov. 2010) | ||
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+ | * M Gerstein (2011). [[Fib83_Podcast_from_Other_Papers_for_M_Gerstein|"Bioinformatics: Essential Gene names Skewed in a Network of Blame"]], ''Futures in Biotech'' 83 (podcast moderated by M Pelletier) | ||
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+ | * [[Fib_Podcast3_from_Other_Papers_for_M_Gerstein|"6 PhDs Piled High And Deep"]], a panel discussion moderated by M Pelletier, including G Farr, D Thomas, M Gerstein, S Melov, and J Sanchez. ''Futures in Biotech'' 91 (16 Dec. 2011) | ||
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+ | * M Gerstein (2014). [[SiriusXM_Podcast_from_Other_Papers_for_M_Gerstein|"What in the World"]], ''Sirius XM Radio Canada'', 60' on 20 Nov. (Interview by Richard Garner) | ||
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+ | * M Gerstein (2015). [[Mendelspod_Podcast_from_Other_Papers_for_M_Gerstein|"What Now? Going Beyond the $1,000 Genome"]], ''Mendelspod,'' 17 Sept. (podcast moderated by T Timpson) | ||
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+ | * M Gerstein (2020). [https://linkstream2.gerstein.info/2020/12/22/bbc-media-request-data-sanitisation/ "Data sanitisation tool plugs privacy gap"], ''Naked Genetics,'' 17 Dec. (podcast moderated by P Sansom) | ||
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+ | ==Other Writings (book chapters, popular articles, miscellaneous)== | ||
+ | |||
+ | * C Chothia & M Gerstein. (1992). "Protein Design for Domain Closure," in Muscle as a Machine: Energy Transduction in the Contractile System. (ed. M Morales), 149-153 (NIH, Bethesda, MD). | ||
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+ | * M Gerstein. (1994). "Benefits of the Internet," in 51 Reasons: How we use the Internet and What it says about the information superhighway. (ed. M Stone-Martin & L Breeden, Lexington, MA, Federation of American Research Networks). | ||
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+ | * M Gerstein (1995). "A Protein Motions Database," Protein Data Bank Quarterly Newsletter 73: 2 (July 1995). | ||
==Patent Applications== | ==Patent Applications== | ||
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* M Kimber, M Gerstein, C Arrowsmith, A Edwards. "Protein Data Analysis". PCT/US01//30311 filed on 27 Sept. 2001 A edwards, C Arrowsmith, M Kimber, M Gerstein US Patent 09/965564 | * M Kimber, M Gerstein, C Arrowsmith, A Edwards. "Protein Data Analysis". PCT/US01//30311 filed on 27 Sept. 2001 A edwards, C Arrowsmith, M Kimber, M Gerstein US Patent 09/965564 | ||
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==Note== | ==Note== | ||
All of this is in addition to main scientific papers at http://papers.gersteinlab.org and lectures at http://lectures.gersteinlab.org . | All of this is in addition to main scientific papers at http://papers.gersteinlab.org and lectures at http://lectures.gersteinlab.org . |
Latest revision as of 21:11, 16 January 2021
Contents |
Opinion Pieces (Op-Eds)
- D Greenbaum & M Gerstein (2008). "Danger: Sharing Gene Data", Hartford Courant, July 10, pg. A11 (oped)
- D Greenbaum & M Gerstein (2008). "Personal genomics requires redefining privacy -- The human blueprint: dangerous secrets", SF Chronicle, Nov. 2, Page 2 (Insight)
- M Seringhaus & M Gerstein (2009). "Putting too much information online can erode individual privacy", Hartford Courant, June 5 (oped)
- D Greenbaum & M Gerstein (2010). "Exploring genetics of professional athletes", SF Chronicle, May 2, Page E-4 (Insight)
- D Greenbaum & M Gerstein (2012). "The Age of Genetically Optimized Sports", Wall Street Journal, July 24, Page A13 (Opinion)
- D Greenbaum & M Gerstein (2013). "Your DNA vulnerable to snooping, too?", USA Today, July 27 (Opinion)
- D Greenbaum & M Gerstein (2015). "Too big to close down: Websites need regulation like utilities", SF Chronicle, April 24 (Opinion)
- D Greenbaum & M Gerstein (2015). "Why can employers fingerprint, but not test workers’ DNA?", SF Chronicle, July 10 (Opinion)
- D Greenbaum & M Gerstein (2016). "Going beyond geek chic -- CeBIT", SF Chronicle, March 10 (Opinion)
- D Greenbaum & M Gerstein (2017). "Pooling data from wearables could boost health benefits", SF Chronicle, Feb. 24 (Opinion)
- D Greenbaum & M Gerstein (2018). "Our smart devices must be made to forget us", SF Chronicle, Oct. 18 (Opinion)
- G Gursoy & M Gerstein (2020). "As coronavirus testing expands, new personal privacy issues arise", Hartford Courant, July 19 (oped)
- M Gerstein & J Peccia (2020). "What secondhand smoke tells us about the coronavirus", New Haven Register, Dec. 12 (Opinion)
- M Gerstein & D Greenbaum (2021). "Georgia Senate runoff: Using predictive analytics and big data properly", Jerusalem Post Opinion, Jan. 6 (Opinion)
Letters to the Editor (in the Popular Press)
- M Gerstein (1996). "Porting Unix", Byte (Aug.)
- M Gerstein (1997). "How Smart Can It Be?", NY Times (13 May)
- M Gerstein (1998). "A New Stadium? Let's Vote on It", NY Times (11 June)
- M Gerstein (1999). "Daemon Seedlings", Wired (Issue 7.08, Aug.)
- M Gerstein (1999). "Life Beyond the Abacus", NY Times (6 Dec.)
- M Gerstein (1999). "Re: Riding the Mo In the Lime Green Glow", NY Times (19 Dec.)
- M Gerstein (2006). "Reclusive Genius" , NY Times (3 Sept.)
- M Gerstein (2006). "Re: Homo Conexus", Tech Review (Sept.-Oct.)
- M Gerstein (2006). "Programming Pedigrees", American Scientist (Nov.-Dec.)
- M Gerstein & A Smith (2007). "The Semantic Web", Tech Review (Jul.-Aug.)
- M Gerstein (2007). "DNA Rights and Wrongs", Washington Post (7 Sept., A20)
- M Gerstein (2008). "23andMashup", Wired (issue 16.02, Feb., pg. 17)
- D Greenbaum & M Gerstein (2009). "Can't run from DNA", New Scientist (issue 2727, 23 Sept., pgs. 28-29)
- M Gerstein (2010). "Harness DNA Memory", American Scientist (Mar.-Apr.)
- D Greenbaum & M Gerstein (2010). "Testing Isn’t Everything", NY Times (17 Apr.)
- D Greenbaum & M Gerstein (2010). "Regulating the Genome", Forbes (26 Apr.)
- D Greenbaum & M Gerstein (2010). "Thrills and Traps, Lurking on the Web", NY Times (12 May, pg. A24)
- M Gerstein (2010). "The Outlook for Libraries", Harvard Magazine (July-August issue)
- D Greenbaum & M Gerstein (2010). "Concern for Privacy", NY Times (17 Oct., pg. SP11)
- D Greenbaum & M Gerstein (2011). "The Benefits of Snooping", Tech Review (Jul.-Aug.)
- D Greenbaum & M Gerstein (2011). "Sharing Too Much Online", NY Times (7 Oct.)
- M Gerstein (2013). "Cyberattacks on Universities, and How to Thwart Them", NY Times (24 Jul., pg A22)
- M Gerstein (2014). "Getting Personal", American Scientist (May-Jun., vol. 12, pg. 163)
- D Greenbaum & M Gerstein (2015). "An Emerging Field", American Scientist (May-Jun., vol. 103, pg. 164)
- M Gerstein (2015). "The Full Monte Carlo", American Scientist (Nov-Dec., vol. 103, Num. 6, pg. 374)
- D Greenbaum & M Gerstein (2016). "A Cyberattack & Medical Devices", NY Times (2 Nov., Opinion Pages)
Recorded Panel Discussions & Interviews
- M Gerstein (2008). "A Great Historical Document - The Human Genome", Futures in Biotech 34 (podcast moderated by M Pelletier)
- "A Closer Look at Personal Genomic Testing", Inforum Genomics Panel, at the Commonwealth Club of California, including L Avey, D Ballon, D Magnus, M Gerstein, J Rae-Dupree (2009)
- "Whose DNA is it?", a panel discussion on Personal Genomics, on the Agenda with Steve Paikin, as part of the Quantum to Cosmos Festival (Q2C) in Waterloo, ON, 21 Oct. 2009
- "Genomics, Proteomics, Cellular Immunity, and Anti-Matter", a panel discussion moderated by M Pelletier, including V Racaniello, A Nantel, M Gerstein, and G Farr. Futures in Biotech 71 (22 Nov. 2010)
- M Gerstein (2011). "Bioinformatics: Essential Gene names Skewed in a Network of Blame", Futures in Biotech 83 (podcast moderated by M Pelletier)
- "6 PhDs Piled High And Deep", a panel discussion moderated by M Pelletier, including G Farr, D Thomas, M Gerstein, S Melov, and J Sanchez. Futures in Biotech 91 (16 Dec. 2011)
- M Gerstein (2014). "What in the World", Sirius XM Radio Canada, 60' on 20 Nov. (Interview by Richard Garner)
- M Gerstein (2015). "What Now? Going Beyond the $1,000 Genome", Mendelspod, 17 Sept. (podcast moderated by T Timpson)
- M Gerstein (2020). "Data sanitisation tool plugs privacy gap", Naked Genetics, 17 Dec. (podcast moderated by P Sansom)
Other Writings (book chapters, popular articles, miscellaneous)
- C Chothia & M Gerstein. (1992). "Protein Design for Domain Closure," in Muscle as a Machine: Energy Transduction in the Contractile System. (ed. M Morales), 149-153 (NIH, Bethesda, MD).
- M Gerstein. (1994). "Benefits of the Internet," in 51 Reasons: How we use the Internet and What it says about the information superhighway. (ed. M Stone-Martin & L Breeden, Lexington, MA, Federation of American Research Networks).
- M Gerstein (1995). "A Protein Motions Database," Protein Data Bank Quarterly Newsletter 73: 2 (July 1995).
Patent Applications
Granted
Submitted
- A Drawid, M Gerstein. "A Method for Predicting Subcellular Localization of Proteins using a Bayesian System that Integrates Expression Data with Sequence Patterns."
- M Kimber, M Gerstein, C Arrowsmith, A Edwards. "Protein Data Analysis". PCT/US01//30311 filed on 27 Sept. 2001 A edwards, C Arrowsmith, M Kimber, M Gerstein US Patent 09/965564
Note
All of this is in addition to main scientific papers at http://papers.gersteinlab.org and lectures at http://lectures.gersteinlab.org .