Pubmed query

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==Other Views==
==Other Views==
-
There are number of simplified views of the papers page available, with no extra links, viz:
+
There are a number of simplified views of the papers page available, with no extra links, viz:
[http://papers.gersteinlab.org/simple.html '''title-first listing'''] and [http://papers.gersteinlab.org/papers/papers-simple.html traditional author-first listing]
[http://papers.gersteinlab.org/simple.html '''title-first listing'''] and [http://papers.gersteinlab.org/papers/papers-simple.html traditional author-first listing]
-
(These are suitable for copying into Word.)
+
(These are suitable for copying into Word.) Also, here's a simple [http://papers.gersteinlab.org/papers directory listing] with all the paper IDs.
-
Spreadsheet of Paper IDs and PubMed IDs with other annotation: MBGLab--Papers-Master ([https://docs.google.com/spreadsheet/pub?hl=en_US&hl=en_US&key=0AiiHlTECOi8edGhzSXlZZzEyRThQeDB6R0pRc0FvcGc&output=html HTML]) ([https://docs.google.com/spreadsheet/pub?hl=en_US&hl=en_US&key=0AiiHlTECOi8edGhzSXlZZzEyRThQeDB6R0pRc0FvcGc&output=csv CSV])
+
==Notes on Publication List==
 +
 
 +
[https://www.dropbox.com/scl/fi/g7ll9amhfnn90a23tgt2i/Notes-on-publications-FROM-M-Gerstein-CV-bld6Jan24-Public-CV-Jan-2024.cv57.pdf?rlkey=3xvtph03hkpm3ca6x461pmw6g&dl=0 Information on Corresponding Author and Citation Stats of Gerstein Lab Papers]
==PubMed Queries==
==PubMed Queries==
-
* [http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=PureSearch&db=pubmed&dispmax=200&relpubdate=No%20Limit&term=%28%28Gerstein%20M%5BAuthor%5D%20NOT%20%281957%5Bdp%5D%20%3A%201990%5Bdp%5D%29%29%20NOT%2010787728%5BUID%5D%20NOT%2011744447%5BUID%5D%20NOT%2014663468%5BUID%5D%20NOT%2014730174%5BUID%5D%20NOT%2016081066%5BUID%5D%20NOT%2014663468%5BUID%5D%20NOT%2017270657%5BUID%5D%20NOT%2021243890%5BUID%5D%20NOT%2021406498%5BUID%5D%20NOT%2021945273%5BUID%5DOR%2015499007%5BUID%5D%20OR%2017571346%5BUID%5D%20OR%2017571346%5BUID%5D%20OR%208877505%5BUID%5D%20OR%208816770%5BUID%5D%20OR%207540695%5BUID%5D%20OR%207567918%5BUID%5D%20OR%207567918%5BUID%5D%20OR%207577841%5BUID%5D%20OR%207567917%5BUID%5D%20OR%207643385%5BUID%5D%20OR%208749848%5BUID%5D%20OR%208808580%5BUID%5D%20OR%208120887%5BUID%5D%20OR%208029203%5BUID%5D%20OR%208204609%5BUID%5D%20OR%207922041%5BUID%5D%20OR%207584390%5BUID%5D%20OR%208078776%5BUID%5D%20OR%208428572%5BUID%5D%20OR%208429559%5BUID%5D%20OR%208464069%5BUID%5D%20OR%208234227%5BUID%5D%20OR%208230220%5BUID%5D%20OR%201584800%5BUID%5D%20OR%202067013%5BUID%5D%20OR%2020981092%5BUID%5D%20OR%2021526222%5BUID%5D%29 '''Query'''] to build papers page into PubMed
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* [https://pubmed.ncbi.nlm.nih.gov/?term=%28%28Gerstein+M%5BAuthor%5D+OR+Gerstein+MB%5BAuthor%5D+OR+Gerstein+Mark%5BAuthor%5D+NOT+%281957%5Bdp%5D+%3A+1990%5Bdp%5D%29%29+NOT+Gerstein+Maya%5BAuthor%5D+NOT+Gerstein+ME%5BAuthor%5D+NOT+Gerstein+Matthew%5BAuthor%5D+NOT+Gerstein+MI%5BAuthor%5D+NOT+11744447%5BUID%5D+NOT+16081066%5BUID%5D+NOT+14663468%5BUID%5D+NOT+21243890%5BUID%5D+OR+15499007%5BUID%5D+OR+17571346%5BUID%5D+OR+17571346%5BUID%5D+OR+8877505%5BUID%5D+OR+8816770%5BUID%5D+OR+7540695%5BUID%5D+OR+7567918%5BUID%5D+OR+7567918%5BUID%5D+OR+7577841%5BUID%5D+OR+7567917%5BUID%5D+OR+7643385%5BUID%5D+OR+8749848%5BUID%5D+OR+8808580%5BUID%5D+OR+8120887%5BUID%5D+OR+8029203%5BUID%5D+OR+8204609%5BUID%5D+OR+7922041%5BUID%5D+OR+7584390%5BUID%5D+OR+8078776%5BUID%5D+OR+8428572%5BUID%5D+OR+8429559%5BUID%5D+OR+8464069%5BUID%5D+OR+8234227%5BUID%5D+OR+8230220%5BUID%5D+OR+1584800%5BUID%5D+OR+2067013%5BUID%5D+OR+20981092%5BUID%5D+OR+21526222%5BUID%5D%29&sort=date&size=50 '''New Query (updated 7/21/2020)'''] to build papers page into PubMed
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* [http://papers.gersteinlab.org/update/NCBIData.xml Current NCBI XML File]
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* [http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=PureSearch&db=pubmed&dispmax=200&relpubdate=No%20Limit&term=((Gerstein+M%5BAuthor%5D+OR+Gerstein+MB%5BAuthor%5D+OR+Gerstein+Mark%5BAuthor%5D+NOT+(1957%5Bdp%5D+%3A+1990%5Bdp%5D))+NOT+Gerstein+Maya%5BAuthor%5D+NOT+Gerstein+ME%5BAuthor%5D+NOT+Gerstein+Matthew%5BAuthor%5D+NOT+Gerstein+MI%5BAuthor%5D+NOT+11744447%5BUID%5D+NOT+16081066%5BUID%5D+NOT+14663468%5BUID%5D+NOT+21243890%5BUID%5D+OR+15499007%5BUID%5D+OR+17571346%5BUID%5D+OR+17571346%5BUID%5D+OR+8877505%5BUID%5D+OR+8816770%5BUID%5D+OR+7540695%5BUID%5D+OR+7567918%5BUID%5D+OR+7567918%5BUID%5D+OR+7577841%5BUID%5D+OR+7567917%5BUID%5D+OR+7643385%5BUID%5D+OR+8749848%5BUID%5D+OR+8808580%5BUID%5D+OR+8120887%5BUID%5D+OR+8029203%5BUID%5D+OR+8204609%5BUID%5D+OR+7922041%5BUID%5D+OR+7584390%5BUID%5D+OR+8078776%5BUID%5D+OR+8428572%5BUID%5D+OR+8429559%5BUID%5D+OR+8464069%5BUID%5D+OR+8234227%5BUID%5D+OR+8230220%5BUID%5D+OR+1584800%5BUID%5D+OR+2067013%5BUID%5D+OR+20981092%5BUID%5D+OR+21526222%5BUID%5D) '''Query'''] to build papers page into PubMed
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* [http://oldpapers.gersteinlab.org/search/labquery.pl?query=default (Old) link to construct above]
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* ([http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=PureSearch&db=pubmed&dispmax=200&relpubdate=No%20Limit&term=((Gerstein+M%5BAuthor%5D+NOT+(1957%5Bdp%5D+%3A+1990%5Bdp%5D))+NOT+10787728%5BUID%5D+NOT+11744447%5BUID%5D+NOT+14663468%5BUID%5D+NOT+14730174%5BUID%5D+NOT+16081066%5BUID%5D+NOT+14663468%5BUID%5D+NOT+17270657%5BUID%5D+NOT+21243890%5BUID%5D+NOT+21406498%5BUID%5D+NOT+21945273%5BUID%5D+NOT+28562279%5BUID%5D+OR+15499007%5BUID%5D+OR+17571346%5BUID%5D+OR+17571346%5BUID%5D+OR+8877505%5BUID%5D+OR+8816770%5BUID%5D+OR+7540695%5BUID%5D+OR+7567918%5BUID%5D+OR+7567918%5BUID%5D+OR+7577841%5BUID%5D+OR+7567917%5BUID%5D+OR+7643385%5BUID%5D+OR+8749848%5BUID%5D+OR+8808580%5BUID%5D+OR+8120887%5BUID%5D+OR+8029203%5BUID%5D+OR+8204609%5BUID%5D+OR+7922041%5BUID%5D+OR+7584390%5BUID%5D+OR+8078776%5BUID%5D+OR+8428572%5BUID%5D+OR+8429559%5BUID%5D+OR+8464069%5BUID%5D+OR+8234227%5BUID%5D+OR+8230220%5BUID%5D+OR+1584800%5BUID%5D+OR+2067013%5BUID%5D+OR+20981092%5BUID%5D+OR+21526222%5BUID%5D) '''Old Query'''])
* [http://linkstream2.gerstein.info/2013/11/30/pubmed-help-searching-for-specific-last-and-first-authors-3 Useful stuff in searching for specific last or first authors], which can result in some [[Useful Stats on Gerstein Lab Papers]]
* [http://linkstream2.gerstein.info/2013/11/30/pubmed-help-searching-for-specific-last-and-first-authors-3 Useful stuff in searching for specific last or first authors], which can result in some [[Useful Stats on Gerstein Lab Papers]]
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==Publication Analysis Services ==
+
* [[Papers published with individuals who have left]] Yale
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* Google Scholar: '''http://scholar.google.ca/scholar?q=author:gerstein-m''' , [http://papers.gersteinlab.org/papers/misc/google.html Google Citation Summary]
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* [http://www.ncbi.nlm.nih.gov/sites/myncbi/mark.gerstein.1/bibliography/44005333/public My NCBI] link of 445 M Gerstein papers as of Feb 2015 with PMIDs (via mark at gersteinlab user)
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* [http://academic.research.microsoft.com/author/984673 Microsoft Academic Search Profile for M Gerstein]
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==Publication Analysis Services==
 +
 
 +
* Google Scholar: '''http://scholar.google.ca/scholar?q=author:gerstein-m''' ([https://scholar.google.com/citations?hl=en&view_op=search_authors&mauthors=yale Ranking] of Yale researchers according to Scholar - we do well.)
 +
 
 +
* [http://orcid.org/0000-0002-9746-3719 ORCID.org/0000-0002-9746-3719] for M Gerstein (very incomplete)
 +
 
 +
* Highly Cited Researchers lists
 +
** [https://linkstream2.gerstein.info/2016/11/21/archives-hcr-clarivate-analytics Thomson Reuters HIGHLY CITED RESEARCHERS (HCR) List] (on this '14, '15, '16)
 +
** [https://hcr.clarivate.com Clarivate List] (supersedes above, on this in '17 & '18)
 +
 
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==Paper Search==
 +
 
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Adopted from [[Paper_search]]
 +
 
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===Medline Queries:===
 +
 
 +
[http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=PureSearch&db=PubMed&details_term=%28%28Gerstein%20M%5BAuthor%5D%20NOT%20%281963%5Bdp%5D%20%3A%201990%5Bdp%5D%29%29%20NOT%2011744447%5BUID%5D%20NOT%2010787728%5BUID%5D%29&dispmax=200&relpubdate=No+Limit Gerstein M] / [http://www4.ncbi.nlm.nih.gov/htbin-post/Entrez/query?form=4&db=m&term=Gerstein+M&dispmax=200&relpubdate=No+Limit Gerstein M] (unrestricted) /
 +
[http://www.informatik.uni-trier.de/~ley/db/indices/a-tree/g/Gerstein:Mark.html DBLP] / [http://liinwww.ira.uka.de/searchbib/index?query=GersteinM CS Bibliographies] /
 +
[http://citeseer.nj.nec.com/cs?cs=1&q=m+gerstein+or+mark+gerstein&co=Expected+Citations&cm=50&cf=Any&ao=Expected+Citations&am=20&af=Any CiteSeer]
 +
 
 +
http://pubnet.gersteinlab.org/images/mainlogo.jpg
 +
 
 +
PubNet Graph of Gerstein Lab Publications ([http://pubnet.gersteinlab.org/cgi-bin/graph.pl?query1=((Gerstein%20M%5BAuthor%5D%20NOT%20(1957%5Bdp%5D%20:%201990%5bdp%5d))%20NOT%2011744447%5BUID%5d%20NOT%2014663468%5BUID%5D%20NOT%2010787728%5BUID%5D%20NOT%2014730174%5BUID%5D%20NOT%2012140549%5BUID%5D%20NOT%2014704431%5BUID%5D%20)&node=author&edge=coauthor current]) ([http://pubnet.gersteinlab.org/cgi-bin/view.pl?id=050607170530 cached])
 +
 
 +
PubNet Graph of Gerstein and Montelione papers [http://www.nesg.org/ NESG] ([http://pubnet.gersteinlab.org/cgi-bin/graph.pl?query1=Gaetano%20Montelione&query2=((Gerstein%20M%5BAuthor%5D%20NOT%20(1957%5Bdp%5D%20:%201990%5Bdp%5D))%20NOT%2011744447%5BUID%5D%20NOT%2014663468%5BUID%5D%20NOT%2010787728%5BUID%5D%20NOT%2014730174%5BUID%5D%20NOT%2012140549%5BUID%5D%20NOT%2014704431%5BUID%5D%20)&node=author&edge=coauthor current]) ([http://pubnet.gersteinlab.org/cgi-bin/view.pl?id=050607171018 cached])
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 +
PubNet Graph of Gerstein and Snyder papers [http://bioinfo.mbb.yale.edu/array/ CEGS] ([http://pubnet.gersteinlab.org/cgi-bin/graph.pl?query1=((Gerstein%20M%5BAuthor%5D%20NOT%20(1957%5Bdp%5D%20:%201990%5Bdp%5D))%20NOT%2011744447%5BUID%5D%20NOT%2014663468%5BUID%5D%20NOT%2010787728%5BUID%5D%20NOT%2014730174%5BUID%5D%20NOT%2012140549%5BUID%5D%20NOT%2014704431%5BUID%5D%20)&query2=snyder%20m%20and%20yale&node=author&edge=coauthor current]) ([http://pubnet.gersteinlab.org/cgi-bin/view.pl?id=050607171429 cached])
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===Lists of Papers===
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 +
[http://papers.gersteinlab.org/index.html Main]
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[http://papers.gersteinlab.org/papers/papers-simple.html Simple]
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[http://papers.gersteinlab.org/papers/papers-ids.htm Table]
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[http://papers.gersteinlab.org/papers/papers-tags.htm XML tags]
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[http://papers.gersteinlab.org/papers/before97.shtml Pre 1997]
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[[Other_Papers]]
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===Pre-prints:===
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[http://papers.gersteinlab.org/e-print E-print <sup>&dagger;</sup>] with full-text of some papers in press ([http://papers.gersteinlab.org/papers/help.shtml help] on this)
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<sup>&dagger;</sup>[http://www.gersteinlab.org/misc/permissions.html Please see our copyright statement]
 +
 
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==Sortable Lists of Publication Metrics==
 +
 
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===Sortable spreadsheets of Google Scholar & Web of Science & Altmetric (Dec 4, 2019)===
 +
[https://drive.google.com/file/d/1p5_J7Y8nt0WvXE5V7J4XYZ6LEMuwOAUC/view?usp=sharing Altmetric]
 +
[https://drive.google.com/file/d/1Kn8eEpLUzulOtDx_XBXVc1jzb0pJNL2w/view?usp=sharing WoS]
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[https://drive.google.com/file/d/1TmN_e8Fm3Cy4kKD8ILHl7-CFQhsEbQJM/view?usp=sharing GScholar]
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& that again w/ MG as last/first author
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[https://drive.google.com/file/d/1vAZbrivv_2yadY5YFyGvZYaz1o7CSkcz/view?usp=sharing Altmetric]
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[https://drive.google.com/file/d/1lOHkuXbOZNY2k39NdtUm3lT3Xv0dP5pP/view?usp=sharing WoS]
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[https://drive.google.com/file/d/1wttEpxxBJUM0Guq0P1zgfin-Tph9GNdc/view?usp=sharing GScholar]
 +
 
 +
 
 +
===Overall citation stats (Dec 4, 2019)===
 +
595 publications
 +
 
 +
Cited 144003 times and h-index: 166 (GScholar)
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 +
No. papers with over 1000 citations each ------ No. all papers - 22 (No. papers w MG last/first author - 4)
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No. papers with 501-1000 citations each ------ 30 (12)
 +
 
 +
No. papers with 201-500 citations each ------ 78 (40)
 +
 
 +
No. papers with 101-200 citations each ------ 112 (64)
 +
 
 +
No. papers with 51-100 citations each ------ 93 (56)
 +
 
 +
No. papers with 50 citations or less each ------ 295 (187)  # doesn’t include papers that don’t have a GScholar citation count, i.e. are non-citable or haven't been cited yet
 +
 
 +
 
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[https://drive.google.com/file/d/1rKaLefE71LRvSfCkXoir_SeiNo9nYBnB/view?usp=sharing Number of publications by journal names]
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* [http://www.scholaruniverse.com/profiles/people/090B29F9AC1BD0111E322273EF928B1C Scholar Universe]
 
==Misc==
==Misc==
-
[[Information on Corresponding Author of Gerstein Lab Papers]]
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=== dump up to the end of '19 ===
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[http://files.gersteinlab.org/public-docs/2019/12.27/cv57-30-bld31Dec19--papers-simple--reformatted2.pdf scientific papers]
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=== dump up to the end of '18 ===
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[http://files.gersteinlab.org/public-docs/2019/02.14/cv57-30-bld1jan19--papers-simple--reformatted.pdf scientific papers]
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[http://files.gersteinlab.org/public-docs/2019/02.14/cv57-26-bld1Jan19--addendum-Rest.pdf other writings]
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=== dump up to the end of '17 ===
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[http://files.gersteinlab.org/public-docs/2018/01.10/cv57-30-bld8Jan18--papers-simple-refmt.pdf scientific papers]
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[http://files.gersteinlab.org/public-docs/2018/01.10/cv57-26-bld8Jan18--addendum-Rest.JustOtherPubs.pdf other writings]
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=== dump up to the end of '16 ===
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 +
[http://archive.gersteinlab.org/public-docs/2017/03.26/2016-summary--cv57/cv57-26-bld1dec16--addendum-Rest--Just-Other-Writings.pdf scientific papers]
 +
[http://archive.gersteinlab.org/public-docs/2017/03.26/2016-summary--cv57/cv57-30-bld1dec16--papers-simple--reformatted.pdf other writings]
 +
 
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=== dump up to the end of '15 ===
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[http://archive.gersteinlab.org/public-docs/2016/01.31/cv57/papers-page-dump-28Jan16/cv57-30--papers-simple--reformatted--28Jan16--FAR.pdf scientific papers]
 +
[http://archive.gersteinlab.org/public-docs/2016/01.31/cv57/papers-page-dump-28Jan16/cv57-27-28Jan16--FAR--Rest--other-papers.pdf other writings]
 +
 
 +
=== dump up to the end of '14 ===
 +
 
 +
[http://archive.gersteinlab.org/public-docs/2015/01.30/cv/M-Gerstein-pubs-CV-31Dec2014.pdf scientific papers]
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 +
=== dump up to the end of '13 ===
 +
 
 +
[http://archive.gersteinlab.org/mark/out/log/2014/06.20/cv/M-Gerstein-pubs-CV-31Dec2013.pdf scientific papers]
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 +
== Broken & Defunct ==
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 +
<SMALL>
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* [http://papers.gersteinlab.org/update/NCBIData.xml Current NCBI XML File]
 +
 
 +
* [http://oldpapers.gersteinlab.org/search/labquery.pl?query=default (Old) link to construct above]
 +
 
 +
* [http://www.scholaruniverse.com/profiles/people/090B29F9AC1BD0111E322273EF928B1C Scholar Universe]
 +
 
 +
* [http://papers.gersteinlab.org/papers/misc/google.html Google Citation Summary]
 +
 
 +
* [http://academic.research.microsoft.com/author/984673 Microsoft Academic Search Profile for M Gerstein]
 +
 
 +
</SMALL>

Latest revision as of 23:49, 6 January 2024

Contents

Other Views

There are a number of simplified views of the papers page available, with no extra links, viz: title-first listing and traditional author-first listing (These are suitable for copying into Word.) Also, here's a simple directory listing with all the paper IDs.

Notes on Publication List

Information on Corresponding Author and Citation Stats of Gerstein Lab Papers

PubMed Queries

  • Query to build papers page into PubMed
  • My NCBI link of 445 M Gerstein papers as of Feb 2015 with PMIDs (via mark at gersteinlab user)

Publication Analysis Services

Paper Search

Adopted from Paper_search

Medline Queries:

Gerstein M / Gerstein M (unrestricted) / DBLP / CS Bibliographies / CiteSeer

http://pubnet.gersteinlab.org/images/mainlogo.jpg

PubNet Graph of Gerstein Lab Publications (current) (cached)

PubNet Graph of Gerstein and Montelione papers NESG (current) (cached)

PubNet Graph of Gerstein and Snyder papers CEGS (current) (cached)

Lists of Papers

Main Simple Table XML tags Pre 1997 Other_Papers

Pre-prints:

E-print † with full-text of some papers in press (help on this)

†Please see our copyright statement

Sortable Lists of Publication Metrics

Sortable spreadsheets of Google Scholar & Web of Science & Altmetric (Dec 4, 2019)

Altmetric WoS GScholar

& that again w/ MG as last/first author

Altmetric WoS GScholar


Overall citation stats (Dec 4, 2019)

595 publications

Cited 144003 times and h-index: 166 (GScholar)

No. papers with over 1000 citations each ------ No. all papers - 22 (No. papers w MG last/first author - 4)

No. papers with 501-1000 citations each ------ 30 (12)

No. papers with 201-500 citations each ------ 78 (40)

No. papers with 101-200 citations each ------ 112 (64)

No. papers with 51-100 citations each ------ 93 (56)

No. papers with 50 citations or less each ------ 295 (187) # doesn’t include papers that don’t have a GScholar citation count, i.e. are non-citable or haven't been cited yet


Number of publications by journal names


Misc

dump up to the end of '19

scientific papers

dump up to the end of '18

scientific papers other writings

dump up to the end of '17

scientific papers other writings

dump up to the end of '16

scientific papers other writings

dump up to the end of '15

scientific papers other writings

dump up to the end of '14

scientific papers

dump up to the end of '13

scientific papers

Broken & Defunct

Retrieved from "https://info.gersteinlab.org/Pubmed_query"
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