Resources Related to Hierarchies: Difference between revisions
No edit summary |
No edit summary |
||
| (3 intermediate revisions by the same user not shown) | |||
| Line 3: | Line 3: | ||
Human hierarchy based on ChIP-Seq data from ENCODE | Human hierarchy based on ChIP-Seq data from ENCODE | ||
http://papers.gersteinlab.org/papers/encodenets | http://papers.gersteinlab.org/papers/encodenets | ||
http://encodenets.gersteinlab.org/ | |||
Worm and Fly hierarchies constructed from modENCODE ChIP-Seq data | Worm and Fly hierarchies constructed from modENCODE ChIP-Seq data | ||
| Line 8: | Line 9: | ||
http://papers.gersteinlab.org/papers/wormawg | http://papers.gersteinlab.org/papers/wormawg | ||
Collaboration between middle level regulators in a hierarchy | |||
http://papers.gersteinlab.org/papers/nethier | |||
http://info.gersteinlab.org/Hierarchy | |||
Rewiring in hierarchy | |||
http://papers.gersteinlab.org/papers/hier-rewiring | |||
http://info.gersteinlab.org/Rewiring_hierarchy | |||
Hierarchy in Yeast transcriptional regulatory network | Hierarchy in Yeast transcriptional regulatory network | ||
| Line 14: | Line 21: | ||
http://www.gersteinlab.org/proj/nethierarchy | http://www.gersteinlab.org/proj/nethierarchy | ||
Bacterial hierarchy and call graph | |||
http://papers.gersteinlab.org/papers/callgraph | http://papers.gersteinlab.org/papers/callgraph | ||
http://archive.gersteinlab.org/proj/call_graph/Genome_and_OS.html | |||
Latest revision as of 03:51, 10 October 2013
We have investigated the hierarchical organization of networks in a series of publications.
Human hierarchy based on ChIP-Seq data from ENCODE http://papers.gersteinlab.org/papers/encodenets http://encodenets.gersteinlab.org/
Worm and Fly hierarchies constructed from modENCODE ChIP-Seq data http://papers.gersteinlab.org/papers/mirnet http://papers.gersteinlab.org/papers/wormawg
Collaboration between middle level regulators in a hierarchy http://papers.gersteinlab.org/papers/nethier http://info.gersteinlab.org/Hierarchy
Rewiring in hierarchy http://papers.gersteinlab.org/papers/hier-rewiring http://info.gersteinlab.org/Rewiring_hierarchy
Hierarchy in Yeast transcriptional regulatory network http://papers.gersteinlab.org/papers/nethierarchy/ http://www.gersteinlab.org/proj/nethierarchy
Bacterial hierarchy and call graph http://papers.gersteinlab.org/papers/callgraph http://archive.gersteinlab.org/proj/call_graph/Genome_and_OS.html