Even more tools

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Revision as of 00:40, 19 February 2014 (view source) Public (Talk | contribs) (Blanked the page) ← Older edit		Latest revision as of 19:57, 11 May 2016 (view source) Public (Talk | contribs)
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		+	A resource may be produced without actually being published. Source code for such resources is archived through this page.
		+	:{|class="wikitable sortable" border="1" cellspacing="0" cellpadding="10"
		+	|- bgcolor="lightsteelblue"
		+	!Tool Name!!Project Date!!class="unsortable"|Description
		+	|-style="height: 100px;"
		+	|style="width:15%; text-align:center;"|[https://www.encodeproject.org/comparative/ '''CAPE''']||style="width:7%; text-align:center;"|2014||The transcriptome is the readout of the genome. Identifying common features in it across distant species can reveal fundamental principles. To this end, the ENCODE and modENCODE consortia have generated large amounts of matched RNA-sequencing data for human, worm and fly. Uniform processing and comprehensive annotation of these data allow comparison across metazoan phyla, extending beyond earlier within-phylum transcriptome comparisons and revealing ancient, conserved features.
		+	|-style="height: 100px;"
		+	|style="text-align: center;"|[http://code.google.com/p/lesseq/ '''LESSeq''']<br>[http://github.gersteinlab.org/LESSeq/ Github repo]||style="text-align:center;"|2014||Local Event-based analysis of alternative Splicing using RNA-Seq
		+	|}

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Latest revision as of 19:57, 11 May 2016

A resource may be produced without actually being published. Source code for such resources is archived through this page.

Tool Name	Project Date	Description
CAPE	2014	The transcriptome is the readout of the genome. Identifying common features in it across distant species can reveal fundamental principles. To this end, the ENCODE and modENCODE consortia have generated large amounts of matched RNA-sequencing data for human, worm and fly. Uniform processing and comprehensive annotation of these data allow comparison across metazoan phyla, extending beyond earlier within-phylum transcriptome comparisons and revealing ancient, conserved features.
LESSeq Github repo	2014	Local Event-based analysis of alternative Splicing using RNA-Seq