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Past PhD Students
This is a table listing the past graduate students from the Gerstein Lab with available theses and defense presentations for download.


Andrew Smith
'''Abbreviations:'''
 
<br>CBB: PhD from Computational Biology and Bioinformatics
  AS
<br>CS: PhD Department of Computer Science
 
<br>MB&B: PhD Molecular Biochemistry and Biophysics
9/2002 – 8/14/2007
<br>MCDB: PhD Molecular, Cell and Developmental Biology
 
<br>adv degree: advanced degree/further studies
CS
  <br>jt: joint student
 
<br>
industry Bristol-Myers Squibb
{| border="1" cellpadding="1"
Bioinformatics Developer, Bristol-Myers Squibb 311 Pennington-Rocky Hill Road Pennington, NJ
! scope="col" width="50" align="center" style="background:#f0f0f0;"|'''Alumni'''
Dov Greenbaum
! scope="col" width="50" align="center" style="background:#f0f0f0;"|'''Lab ID'''
 
! scope="col" width="50" align="center" style="background:#f0f0f0;"|'''Lab Dates'''
DG
! scope="col" width="50" align="center" style="background:#f0f0f0;"|'''Other Info. (Affil., funding, etc.)'''
 
! scope="col" width="50" align="center" style="background:#f0f0f0;"|'''Current Position'''
1999 – 2004
! scope="col" width="50" align="center" style="background:#f0f0f0;"|'''Institution'''
 
! scope="col" width="100" align="center" style="background:#f0f0f0;"|'''Thesis/Defense presentation'''
Genetics
|-
 
|Andrew Smith||AS||2002 – 2007||CS||industry||Bristol-Myers Squibb||[http://homes.gersteinlab.org/people/asmith/outbox/thesis/AS_thesis_draft.pdf Thesis]<br>[http://homes.gersteinlab.org/people/asmith/outbox/thesis/thesis_defense_presentation2.ppt Defense]
adv degree UC Berkeley, Stanford
|-
Law Student, UC Berkeley; then Branco Weiss Fellow: Society in Science; Fellow Center for Law and the Biosciences, Stanford University
|Chong Shou||CS||2005-2011||CBB (jt. w. M Snyder)||industry||MF Global||[http://archive.gersteinlab.org/meetings/2011/03.18/CS_Thesis_2011.pdf Thesis]<br>[http://archive.gersteinlab.org/meetings/2011/04.19/THE_Defense.ppt Defense]
Haiyuan Yu
|-
 
|Dov Greenbaum||DG||1999 – 2004||Genetics||adv degree||UC Berkeley, Stanford||
HY
|-
 
|Haiyuan Yu||HY||2000 – 2005||MB&B||--||Cornell U||
2000 – 2005
|-
 
|Jiang Du||JDU||2004 – 2010||CS (jt. w. D McDermott)||industry||JP Morgan|| [http://archive.gersteinlab.org/docs/2010/05.31/jdu_phd_thesis.pdf Thesis]<br>[http://archive.gersteinlab.org/docs/2010/05.31/jdu_phd_defense.pdf Defense]
MB&B
|-
 
|Kevin (Yuk-Lap) Yip||KY||2004 - 2009||CS||faculty||The Chinese University of Hong Kong||
-- Cornell U
|-
Assistant Professor
|Michael Seringhaus||MS||2001 – 2007||||adv degree||Alaska Supreme Court||
Jiang Du
|-
 
|Paul Bertone||PB||1998 – 2005||MCDB (jt. with M Snyder)||faculty||EBI||
JDU
|-
 
|Prianka Patel||PP||2004 – 2010||MB&B (jt. w. D Engelman)||--||--||[http://wiki.gersteinlab.org/labinfo/Theses Thesis/Defense]
9/2004 – 2/2010
|-
 
|Rajdeep Das||RD||1998 – 2004||Chemistry||postdoc||CSHL||
CS (jt. w. D McDermott)
|-
 
|Ronald Jansen||RJ||1997 – 2002||MB&B||industry||Goldman Sachs||
industry JP Morgan
|-
Michael Seringhaus
|Samuel Flores||SF||2004 – 2007||Physics||postdoc||Stanford||
 
|-
MS
|Tara Gianoulis||TG||2003 – 2009||CBB (jt. w. M Snyder)||postdoc||Harvard||
 
|-
9/2001 – 9/4/2007
|Ted Johnson||TJ||1996 – 2003||MB&B||--||
 
|-
 
|Thomas Royce||TR||2002 – 2007||CBB||industry||Illumina||
adv degree Alaska Supreme Court
|-
Law Clerk to Justice Craig F. Stowers
|Vadim Alexandrov||VA||1998 – 2003||||industry||--||
Paul Bertone
|-
 
|William Grenawitzke||WG||2006 – 2006||Cellular & Molecular Physiology||--||
PB
|-
 
|Werner Krebs||WK||1996 – 2001||||postdoc||SDSC||
1998 – 2005
|-
 
|Hugo (Yu Kor) Lam||YHL||2005 – ?||CBB||--||--||[http://archive.gersteinlab.org/meetings/2010/05.31/YHL_Thesis_20100525.pdf Thesis]<br>[http://archive.gersteinlab.org/meetings/2010/05.31/YHL_Defense_20100520.pptx Defense]
MCDB (jt. with M Snyder)
|-
 
|Yuen-Jong Liu||YJL||2004 – 2009||Medical Student||--||Harvard Medical School||
faculty EBI
|}
Group Leader, EBI, Cambridge, UK
Prianka Patel
 
PP
 
9/2004 – 5/31/2010
 
MB&B (jt. w. D Engelman)
 
-- --
Rajdeep Das
 
RD
 
1998 – 2004
 
Chemistry
 
postdoc CSHL
Post-Doc, CSHL; then Law Student
Ronald Jansen
 
RJ
 
1997 – 2002
 
MB&B
 
industry Goldman Sachs
Goldman Sachs, New York
Samuel Flores
 
SF
 
9/2004 – 7/30/2007
 
Physics
 
postdoc Stanford
Post-doc, Distinguished Simibios Fellow, Stanford University
Tara Gianoulis
 
TG
 
9/2003 – 8/2009
 
CBB (jt. w. M Snyder)
 
postdoc Harvard
Post-Doc, Church Lab, Harvard Med
Ted Johnson
 
TJ
 
1996 – 2003
 
MB&B
 
-- --
Thomas Royce
 
TR
 
5/2002 – 9/25/2007
 
CBB
 
industry Illumina
Scientist, Illumina Inc, 9885 Towne Centre Drive, San Diego, CA 92121-1975
Vadim Alexandrov
 
VA
 
1998 – 2003
 
 
industry --
Bioinformatics Consulting
William Grenawitzke
 
WG
 
5/2006 – 12/2006
 
Cellular & Molecular Physiology
 
-- --
Werner Krebs
 
WK
 
1996 – 2001
 
 
postdoc SDSC
Post-Doc at PDB at SDSC, Industry
Hugo (Yu Kor) Lam
 
YHL
 
9/2005 – ?
 
CBB
 
-- --
Yuen-Jong Liu
 
YJL
 
8/2004 – 6/2009
 
Medical Student
 
-- Harvard Medical School
Surgery Resident

Latest revision as of 14:37, 7 July 2011

This is a table listing the past graduate students from the Gerstein Lab with available theses and defense presentations for download. 

Abbreviations:

CBB: PhD from Computational Biology and Bioinformatics

CS: PhD Department of Computer Science

MB&B: PhD Molecular Biochemistry and Biophysics

MCDB: PhD Molecular, Cell and Developmental Biology

adv degree: advanced degree/further studies

jt: joint student


Alumni Lab ID Lab Dates Other Info. (Affil., funding, etc.) Current Position Institution Thesis/Defense presentation
Andrew Smith AS 2002 – 2007 CS industry Bristol-Myers Squibb Thesis
Defense
Chong Shou CS 2005-2011 CBB (jt. w. M Snyder) industry MF Global Thesis
Defense
Dov Greenbaum DG 1999 – 2004 Genetics adv degree UC Berkeley, Stanford
Haiyuan Yu HY 2000 – 2005 MB&B -- Cornell U
Jiang Du JDU 2004 – 2010 CS (jt. w. D McDermott) industry JP Morgan Thesis
Defense
Kevin (Yuk-Lap) Yip KY 2004 - 2009 CS faculty The Chinese University of Hong Kong
Michael Seringhaus MS 2001 – 2007 adv degree Alaska Supreme Court
Paul Bertone PB 1998 – 2005 MCDB (jt. with M Snyder) faculty EBI
Prianka Patel PP 2004 – 2010 MB&B (jt. w. D Engelman) -- -- Thesis/Defense
Rajdeep Das RD 1998 – 2004 Chemistry postdoc CSHL
Ronald Jansen RJ 1997 – 2002 MB&B industry Goldman Sachs
Samuel Flores SF 2004 – 2007 Physics postdoc Stanford
Tara Gianoulis TG 2003 – 2009 CBB (jt. w. M Snyder) postdoc Harvard
Ted Johnson TJ 1996 – 2003 MB&B --
Thomas Royce TR 2002 – 2007 CBB industry Illumina
Vadim Alexandrov VA 1998 – 2003 industry --
William Grenawitzke WG 2006 – 2006 Cellular & Molecular Physiology --
Werner Krebs WK 1996 – 2001 postdoc SDSC
Hugo (Yu Kor) Lam YHL 2005 – ? CBB -- -- Thesis
Defense
Yuen-Jong Liu YJL 2004 – 2009 Medical Student -- Harvard Medical School
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