https://info.gersteinlab.org/index.php?action=history&feed=atom&title=Even_more_tools
Even more tools - Revision history
2026-04-25T00:10:44Z
Revision history for this page on the wiki
MediaWiki 1.42.6
https://info.gersteinlab.org/index.php?title=Even_more_tools&diff=3934&oldid=prev
Public at 19:57, 11 May 2016
2016-05-11T19:57:28Z
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 19:57, 11 May 2016</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>!Tool Name!!Project Date!!class="unsortable"|Description</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>!Tool Name!!Project Date!!class="unsortable"|Description</div></td></tr>
<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|-style="height: 100px;"</ins></div></td></tr>
<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">|style="width:15%; text-align:center;"|[https://www.encodeproject.org/comparative/ '''CAPE''']||style="width:7%; text-align:center;"|2014||The transcriptome is the readout of the genome. Identifying common features in it across distant species can reveal fundamental principles. To this end, the ENCODE and modENCODE consortia have generated large amounts of matched RNA-sequencing data for human, worm and fly. Uniform processing and comprehensive annotation of these data allow comparison across metazoan phyla, extending beyond earlier within-phylum transcriptome comparisons and revealing ancient, conserved features.</ins></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>|-style="height: 100px;"</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>|-style="height: 100px;"</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>|style="text-align: center;"|[http://code.google.com/p/lesseq/ '''LESSeq''']<br>[http://github.gersteinlab.org/LESSeq/ Github repo]||style="text-align:center;"|2014||Local Event-based analysis of alternative Splicing using RNA-Seq</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>|style="text-align: center;"|[http://code.google.com/p/lesseq/ '''LESSeq''']<br>[http://github.gersteinlab.org/LESSeq/ Github repo]||style="text-align:center;"|2014||Local Event-based analysis of alternative Splicing using RNA-Seq</div></td></tr>
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Public
https://info.gersteinlab.org/index.php?title=Even_more_tools&diff=3927&oldid=prev
Public at 21:08, 3 May 2016
2016-05-03T21:08:53Z
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 21:08, 3 May 2016</td>
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Public
https://info.gersteinlab.org/index.php?title=Even_more_tools&diff=3926&oldid=prev
Public at 21:08, 3 May 2016
2016-05-03T21:08:21Z
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 21:08, 3 May 2016</td>
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Public
https://info.gersteinlab.org/index.php?title=Even_more_tools&diff=3925&oldid=prev
Public at 21:08, 3 May 2016
2016-05-03T21:08:08Z
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Public
https://info.gersteinlab.org/index.php?title=Even_more_tools&diff=3924&oldid=prev
Public at 21:07, 3 May 2016
2016-05-03T21:07:32Z
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Public
https://info.gersteinlab.org/index.php?title=Even_more_tools&diff=3923&oldid=prev
Public at 21:07, 3 May 2016
2016-05-03T21:07:25Z
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br></td></tr>
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Public
https://info.gersteinlab.org/index.php?title=Even_more_tools&diff=3922&oldid=prev
Public at 21:07, 3 May 2016
2016-05-03T21:07:03Z
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 21:07, 3 May 2016</td>
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<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">Sample text here</del>..</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">A number of resources have been produced without being published</ins>. <ins style="font-weight: bold; text-decoration: none;">Source code for such resources may be accessed in this page</ins>.</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br></td></tr>
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Public
https://info.gersteinlab.org/index.php?title=Even_more_tools&diff=3921&oldid=prev
Public at 21:06, 3 May 2016
2016-05-03T21:06:12Z
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https://info.gersteinlab.org/index.php?title=Even_more_tools&diff=3920&oldid=prev
Public at 20:35, 3 May 2016
2016-05-03T20:35:07Z
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 20:35, 3 May 2016</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>|- bgcolor="lightsteelblue"</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>|- bgcolor="lightsteelblue"</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>!Tool Name!!<del style="font-weight: bold; text-decoration: none;">Release </del>Date!!class="unsortable"|Description</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>!Tool Name!!<ins style="font-weight: bold; text-decoration: none;">Project </ins>Date!!class="unsortable"|Description</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>|-style="height: 100px;"</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>|-style="height: 100px;"</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>|style="text-align: center;"|[http://code.google.com/p/lesseq/ '''LESSeq''']<br>[http://github.gersteinlab.org/LESSeq/ Github repo]||style="text-align:center;"|2014||Local Event-based analysis of alternative Splicing using RNA-Seq</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>|style="text-align: center;"|[http://code.google.com/p/lesseq/ '''LESSeq''']<br>[http://github.gersteinlab.org/LESSeq/ Github repo]||style="text-align:center;"|2014||Local Event-based analysis of alternative Splicing using RNA-Seq</div></td></tr>
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https://info.gersteinlab.org/index.php?title=Even_more_tools&diff=3919&oldid=prev
Public at 20:34, 3 May 2016
2016-05-03T20:34:34Z
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 20:34, 3 May 2016</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>|-style="height: 100px;"</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>|-style="height: 100px;"</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>|style="<del style="font-weight: bold; text-decoration: none;">width:15%; </del>text-align:center;"|[http://<del style="font-weight: bold; text-decoration: none;">yeasthub</del>.<del style="font-weight: bold; text-decoration: none;">gersteinlab</del>.<del style="font-weight: bold; text-decoration: none;">org </del>'''<del style="font-weight: bold; text-decoration: none;">Yeasthub</del>''']||style="<del style="font-weight: bold; text-decoration: none;">width:7%; </del>text-align:center;"|<del style="font-weight: bold; text-decoration: none;">1997</del>||<del style="font-weight: bold; text-decoration: none;">A semantic web</del>-based <del style="font-weight: bold; text-decoration: none;">application which demonstrates how a life sciences data warehouse can be built </del>using <del style="font-weight: bold; text-decoration: none;">a native Resource Description Framework (RDF) data store. This data warehouse allows integration of different types of yeast genome data provided by different resources in different formats including the tabular and RDF formats.</del></div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>|style="text-align: center;"|[http://<ins style="font-weight: bold; text-decoration: none;">code</ins>.<ins style="font-weight: bold; text-decoration: none;">google</ins>.<ins style="font-weight: bold; text-decoration: none;">com/p/lesseq/ </ins>'''<ins style="font-weight: bold; text-decoration: none;">LESSeq</ins>'''<ins style="font-weight: bold; text-decoration: none;">]<br>[http://github.gersteinlab.org/LESSeq/ Github repo</ins>]||style="text-align:center;"|<ins style="font-weight: bold; text-decoration: none;">2014</ins>||<ins style="font-weight: bold; text-decoration: none;">Local Event</ins>-based <ins style="font-weight: bold; text-decoration: none;">analysis of alternative Splicing </ins>using <ins style="font-weight: bold; text-decoration: none;">RNA-Seq</ins></div></td></tr>
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