Theses

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This is a table listing the past graduate students from the Gerstein Lab with available theses and defense presentations for download.
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'''Abbreviations:'''
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<br>CBB: PhD from Computational Biology and Bioinformatics
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<br>CS: PhD Department of Computer Science
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<br>MB&B: PhD Molecular Biochemistry and Biophysics
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<br>MCDB: PhD Molecular, Cell and Developmental Biology
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<br>adv degree: advanced degree/further studies
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<br>jt: joint student
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<br>
{| border="1" cellpadding="1"
{| border="1" cellpadding="1"
! scope="col" width="50" align="center" style="background:#f0f0f0;"|'''Alumni'''
! scope="col" width="50" align="center" style="background:#f0f0f0;"|'''Alumni'''
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! scope="col" width="50" align="center" style="background:#f0f0f0;"|'''Current Position'''
! scope="col" width="50" align="center" style="background:#f0f0f0;"|'''Current Position'''
! scope="col" width="50" align="center" style="background:#f0f0f0;"|'''Institution'''
! scope="col" width="50" align="center" style="background:#f0f0f0;"|'''Institution'''
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! scope="col" width="100" align="center" style="background:#f0f0f0;"|'''Add Info'''
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! scope="col" width="100" align="center" style="background:#f0f0f0;"|'''Thesis/Defense presentation'''
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|Andrew Smith||AS||2002 – 2007||CS||industry||Bristol-Myers Squibb||Bioinformatics Developer, Bristol-Myers Squibb 311 Pennington-Rocky Hill Road Pennington, NJ
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|Andrew Smith||AS||2002 – 2007||CS||industry||Bristol-Myers Squibb||[http://homes.gersteinlab.org/people/asmith/outbox/thesis/AS_thesis_draft.pdf Thesis]<br>[http://homes.gersteinlab.org/people/asmith/outbox/thesis/thesis_defense_presentation2.ppt Defense]
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|Dov Greenbaum||DG||1999 – 2004||Genetics||adv degree||UC Berkeley, Stanford||Law Student, UC Berkeley; then Branco Weiss Fellow: Society in Science; Fellow Center for Law and the Biosciences, Stanford University
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|Chong Shou||CS||2005-2011||CBB (jt. w. M Snyder)||industry||MF Global||[http://archive.gersteinlab.org/meetings/2011/03.18/CS_Thesis_2011.pdf Thesis]<br>[http://archive.gersteinlab.org/meetings/2011/04.19/THE_Defense.ppt Defense]
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|Haiyuan Yu||HY||2000 2005||MB&B||--||Cornell U||Assistant Professor
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|Dov Greenbaum||DG||1999 2004||Genetics||adv degree||UC Berkeley, Stanford||
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|Jiang Du|| JDU||2004 2010||CS (jt. w. D McDermott)||industry||JP Morgan
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|Haiyuan Yu||HY||2000 2005||MB&B||--||Cornell U||
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|Michael Seringhaus|| MS||2001 2007||||adv degree||Alaska Supreme Court||Law Clerk to Justice Craig F. Stowers
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|Jiang Du||JDU||2004 2010||CS (jt. w. D McDermott)||industry||JP Morgan|| [http://archive.gersteinlab.org/docs/2010/05.31/jdu_phd_thesis.pdf Thesis]<br>[http://archive.gersteinlab.org/docs/2010/05.31/jdu_phd_defense.pdf Defense]
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|Paul Bertone||PB||1998 – 2005||MCDB (jt. with M Snyder)||faculty||EBI||Group Leader, EBI, Cambridge, UK
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|Kevin (Yuk-Lap) Yip||KY||2004 - 2009||CS||faculty||The Chinese University of Hong Kong||
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|Prianka Patel||PP||2004 2010||MB&B (jt. w. D Engelman)||--||--
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|Michael Seringhaus||MS||2001 2007||||adv degree||Alaska Supreme Court||
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|Rajdeep Das||RD||1998 – 2004||Chemistry||postdoc||CSHL||Post-Doc, CSHL; then Law Student
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|Paul Bertone||PB||1998 – 2005||MCDB (jt. with M Snyder)||faculty||EBI||
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|Ronald Jansen||RJ||1997 2002||MB&B||industry||Goldman Sachs||Goldman Sachs, New York
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|Prianka Patel||PP||2004 2010||MB&B (jt. w. D Engelman)||--||--||[http://wiki.gersteinlab.org/labinfo/Theses Thesis/Defense]
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|Samuel Flores||SF||2004 2007||Physics||postdoc||Stanford||Post-doc, Distinguished Simibios Fellow, Stanford University
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|Rajdeep Das||RD||1998 2004||Chemistry||postdoc||CSHL||
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|Tara Gianoulis||TG||2003 2009||CBB (jt. w. M Snyder)||postdoc||Harvard||Post-Doc, Church Lab, Harvard Med
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|Ronald Jansen||RJ||1997 2002||MB&B||industry||Goldman Sachs||
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|Ted Johnson||TJ||1996 2003||MB&B||--||--
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|Samuel Flores||SF||2004 2007||Physics||postdoc||Stanford||
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|Thomas Royce||TR||2002 2007||CBB||industry||Illumina||Scientist, Illumina Inc, 9885 Towne Centre Drive, San Diego, CA 92121-1975
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|Tara Gianoulis||TG||2003 2009||CBB (jt. w. M Snyder)||postdoc||Harvard||
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|Vadim Alexandrov||VA||1998 – 2003||||industry||--||Bioinformatics Consulting
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|Ted Johnson||TJ||1996 – 2003||MB&B||--||
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|William Grenawitzke||WG||2006 2006||Cellular & Molecular Physiology||--||--
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|Thomas Royce||TR||2002 2007||CBB||industry||Illumina||
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|Werner Krebs||WK||1996 2001||||postdoc||SDSC||Post-Doc at PDB at SDSC, Industry
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|Vadim Alexandrov||VA||1998 2003||||industry||--||
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|Hugo (Yu Kor) Lam||YHL||2005 ?||CBB||--||--
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|William Grenawitzke||WG||2006 2006||Cellular & Molecular Physiology||--||
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|Yuen-Jong Liu||YJL||2004 – 2009||Medical Student||--||Harvard Medical School||Surgery Resident
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|Werner Krebs||WK||1996 – 2001||||postdoc||SDSC||
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|-
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|Hugo (Yu Kor) Lam||YHL||2005 – ?||CBB||--||--||[http://archive.gersteinlab.org/meetings/2010/05.31/YHL_Thesis_20100525.pdf Thesis]<br>[http://archive.gersteinlab.org/meetings/2010/05.31/YHL_Defense_20100520.pptx Defense]
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|-
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|Yuen-Jong Liu||YJL||2004 – 2009||Medical Student||--||Harvard Medical School||
|}
|}

Latest revision as of 14:37, 7 July 2011

This is a table listing the past graduate students from the Gerstein Lab with available theses and defense presentations for download.

Abbreviations:

CBB: PhD from Computational Biology and Bioinformatics
CS: PhD Department of Computer Science
MB&B: PhD Molecular Biochemistry and Biophysics
MCDB: PhD Molecular, Cell and Developmental Biology
adv degree: advanced degree/further studies
jt: joint student


Alumni Lab ID Lab Dates Other Info. (Affil., funding, etc.) Current Position Institution Thesis/Defense presentation
Andrew SmithAS2002 – 2007CSindustryBristol-Myers SquibbThesis
Defense
Chong ShouCS2005-2011CBB (jt. w. M Snyder)industryMF GlobalThesis
Defense
Dov GreenbaumDG1999 – 2004Geneticsadv degreeUC Berkeley, Stanford
Haiyuan YuHY2000 – 2005MB&B--Cornell U
Jiang DuJDU2004 – 2010CS (jt. w. D McDermott)industryJP Morgan Thesis
Defense
Kevin (Yuk-Lap) YipKY2004 - 2009CSfacultyThe Chinese University of Hong Kong
Michael SeringhausMS2001 – 2007adv degreeAlaska Supreme Court
Paul BertonePB1998 – 2005MCDB (jt. with M Snyder)facultyEBI
Prianka PatelPP2004 – 2010MB&B (jt. w. D Engelman)----Thesis/Defense
Rajdeep DasRD1998 – 2004ChemistrypostdocCSHL
Ronald JansenRJ1997 – 2002MB&BindustryGoldman Sachs
Samuel FloresSF2004 – 2007PhysicspostdocStanford
Tara GianoulisTG2003 – 2009CBB (jt. w. M Snyder)postdocHarvard
Ted JohnsonTJ1996 – 2003MB&B--
Thomas RoyceTR2002 – 2007CBBindustryIllumina
Vadim AlexandrovVA1998 – 2003industry--
William GrenawitzkeWG2006 – 2006Cellular & Molecular Physiology--
Werner KrebsWK1996 – 2001postdocSDSC
Hugo (Yu Kor) LamYHL2005 – ?CBB----Thesis
Defense
Yuen-Jong LiuYJL2004 – 2009Medical Student--Harvard Medical School
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