User contributions
From GersteinInfo
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- 16:37, 6 May 2011 (hist) (diff) Installation and Configuration of FusionSeq (→Installing GSL and GD libraries)
- 14:48, 6 May 2011 (hist) (diff) FusionSeq Requirements (→Drawing tools)
- 17:13, 25 April 2011 (hist) (diff) FusionSeq FAQ (→How can I cite FusionSeq?)
- 14:19, 22 April 2011 (hist) (diff) FusionSeq Requirements (→External)
- 13:37, 19 April 2011 (hist) (diff) FusionSeq Papers
- 13:36, 19 April 2011 (hist) (diff) FusionSeq Papers (→2010)
- 13:09, 19 April 2011 (hist) (diff) FusionSeq
- 17:43, 18 April 2011 (hist) (diff) RSEQtools (→mrf2wig)
- 14:32, 18 April 2011 (hist) (diff) FusionSeq FAQ (→Paired-end reads and bowtie: I aligned each end separately. How do I convert the alignment file to MRF?)
- 13:26, 18 April 2011 (hist) (diff) FusionSeq FAQ (→Paired-end reads and bowtie: I aligned each end separately. How do I convert the alignment file to MRF?)
- 13:26, 18 April 2011 (hist) (diff) FusionSeq FAQ (→Paired-end reads and bowtie: I aligned each end separately. How do I convert the alignment file to MRF?)
- 13:25, 18 April 2011 (hist) (diff) FusionSeq FAQ (→Paired-end reads and bowtie: I aligned each end separately. How do I convert the alignment file to MRF?)
- 13:23, 18 April 2011 (hist) (diff) FusionSeq FAQ (→geneFusions: Segmentation Fault)
- 20:04, 5 April 2011 (hist) (diff) Installation and Configuration of FusionSeq (→Installing GSL and GD libraries)
- 18:06, 5 April 2011 (hist) (diff) FusionSeq List of programs (→gfr2bpJunctions)
- 17:59, 5 April 2011 (hist) (diff) m How to execute FusionSeq (→Junction-Sequence Identifier module) (top)
- 18:03, 31 March 2011 (hist) (diff) FusionSeq Requirements (→Human genome GRCh37/hg19)
- 12:31, 17 February 2011 (hist) (diff) FusionSeq
- 12:26, 17 February 2011 (hist) (diff) FusionSeq (→FusionSeq Requirements)
- 11:20, 17 February 2011 (hist) (diff) FusionSeq List of programs (→geneFusions)
- 11:14, 17 February 2011 (hist) (diff) m How to execute FusionSeq
- 11:18, 16 February 2011 (hist) (diff) How to execute FusionSeq (→Auxilliary data)
- 11:15, 16 February 2011 (hist) (diff) FusionSeq List of programs (→gfr2images)
- 22:43, 3 February 2011 (hist) (diff) FusionSeq List of programs (→Gene Fusion Report (GFR))
- 22:35, 3 February 2011 (hist) (diff) FusionSeq List of programs (→Gene Fusion Report (GFR))
- 21:10, 27 January 2011 (hist) (diff) FusionSeq FAQ (→Compilation troubleshooting)
- 07:11, 8 December 2010 (hist) (diff) FusionSeq Test Datasets (→Auxillliary data)
- 07:07, 8 December 2010 (hist) (diff) FusionSeq Test Datasets (→Auxillliary data)
- 15:59, 7 December 2010 (hist) (diff) FusionSeq
- 12:16, 3 December 2010 (hist) (diff) FusionSeq Test Datasets (→Auxillliary data)
- 06:45, 3 December 2010 (hist) (diff) FusionSeq List of programs (→export2mrf)
- 06:45, 3 December 2010 (hist) (diff) FusionSeq List of programs (→gfrAddInfo)
- 06:44, 3 December 2010 (hist) (diff) How to execute FusionSeq
- 06:43, 3 December 2010 (hist) (diff) m FusionSeq List of programs (→Mis-alignment filters)
- 06:42, 3 December 2010 (hist) (diff) FusionSeq List of programs (→Random pairing of transcript fragments)
- 06:41, 3 December 2010 (hist) (diff) FusionSeq List of programs (→Random pairing of transcript fragments)
- 06:40, 3 December 2010 (hist) (diff) m FusionSeq List of programs (→gfrExpressionConsistency)
- 06:39, 3 December 2010 (hist) (diff) FusionSeq List of programs (→gfrSpliceJunctionFilter)
- 06:37, 3 December 2010 (hist) (diff) How to execute FusionSeq (→Filtration cascade module)
- 06:36, 3 December 2010 (hist) (diff) How to execute FusionSeq
- 08:02, 1 December 2010 (hist) (diff) FusionSeq List of programs (→Gene Fusion Report (GFR))
- 08:00, 1 December 2010 (hist) (diff) FusionSeq List of programs (→gfrAddInfo)
- 07:52, 1 December 2010 (hist) (diff) FusionSeq List of programs (→export2mrf)
- 07:42, 1 December 2010 (hist) (diff) FusionSeq List of programs (→Gene Fusion Report (GFR))
- 07:34, 1 December 2010 (hist) (diff) FusionSeq List of programs (→gfrExpressionConsistency)
- 11:34, 23 November 2010 (hist) (diff) FusionSeq FAQ (→geneFusions: Segmentation Fault)
- 06:51, 21 November 2010 (hist) (diff) How to execute FusionSeq
- 06:50, 21 November 2010 (hist) (diff) m How to execute FusionSeq
- 06:50, 21 November 2010 (hist) (diff) How to execute FusionSeq (→Fusion detection module)
- 18:38, 20 November 2010 (hist) (diff) FusionSeq FAQ
- 18:37, 20 November 2010 (hist) (diff) m How to execute FusionSeq (→Junction-Sequence Identifier module)
- 11:02, 19 November 2010 (hist) (diff) FusionSeq FAQ (→Running issues)
- 12:04, 18 November 2010 (hist) (diff) m Installation and Configuration of FusionSeq (→Installing CGIs)
- 12:04, 18 November 2010 (hist) (diff) m Installation and Configuration of FusionSeq (→Auxiliary modules)
- 12:03, 18 November 2010 (hist) (diff) m Installation and Configuration of FusionSeq (→Installing GSL and GD libraries)
- 12:01, 18 November 2010 (hist) (diff) m FusionSeq FAQ (→Does FusionSeq work with my favorite alignment tool?)
- 11:44, 18 November 2010 (hist) (diff) m FusionSeq FAQ (→Is there a demo version of FusionSeq?)
- 11:44, 18 November 2010 (hist) (diff) N FusionSeq FAQ (Created page with '=General Questions= ==Does FusionSeq work with ''my favorite'' alignment tool?== The format of the paired-end reads that is "understood" by FusionSeq is [[RSEQtools#Mapped_Read_F…')
- 11:44, 18 November 2010 (hist) (diff) m Installation and Configuration of FusionSeq (→Installing and configuring ROOT)
- 06:51, 18 November 2010 (hist) (diff) FusionSeq
- 06:51, 18 November 2010 (hist) (diff) FusionSeq
- 05:08, 10 November 2010 (hist) (diff) How to execute FusionSeq (→Filtration cascade module)
- 05:08, 10 November 2010 (hist) (diff) How to execute FusionSeq
- 03:21, 6 November 2010 (hist) (diff) How to execute FusionSeq
- 03:06, 6 November 2010 (hist) (diff) FusionSeq List of programs (→geneFusions)
- 08:30, 3 November 2010 (hist) (diff) How to execute FusionSeq (→Junction-Sequence identifier)
- 08:09, 3 November 2010 (hist) (diff) FusionSeq Test Datasets
- 01:09, 1 November 2010 (hist) (diff) How to execute FusionSeq
- 01:09, 1 November 2010 (hist) (diff) m FusionSeq List of programs (→gfrConfidenceValues)
- 00:40, 1 November 2010 (hist) (diff) m FusionSeq Papers
- 00:39, 1 November 2010 (hist) (diff) N FusionSeq Papers (Created page with '{{FusionSeqHeader}} Here is a list of papers citing: * Sboner A, Habegger L, Pflueger D, Terry S, Chen DZ, Rozowsky JS, Tewari AK, Kitabayashi N, Moss BJ, Chee MS, Demichelis F,…')
- 00:06, 1 November 2010 (hist) (diff) Installation and Configuration of FusionSeq (→Installing and configuring FusionSeq)
- 01:08, 31 October 2010 (hist) (diff) m FusionSeq Requirements (→Scientific and bioinformatics libraries)
- 23:58, 30 October 2010 (hist) (diff) m FusionSeq Requirements (→Provided)
- 23:44, 30 October 2010 (hist) (diff) FusionSeq Download
- 23:42, 30 October 2010 (hist) (diff) m FusionSeq ChangeLog (top)
- 23:39, 30 October 2010 (hist) (diff) m FusionSeq ChangeLog (→ver. 0.6.0.1)
- 23:36, 30 October 2010 (hist) (diff) m FusionSeq Download
- 23:35, 30 October 2010 (hist) (diff) N FusionSeq ChangeLog (Created page with '{{FusionSeqHeader}} ==ver. 0.6.0.1== released: 2010.10.30 * fixed: pointer to the correct directory TRANSCRIPT_COMPOSITE_MODEL_DIR for the gene annotation interval file ==ver.…')
- 23:23, 30 October 2010 (hist) (diff) FusionSeq Download
- 18:08, 27 October 2010 (hist) (diff) FusionSeq List of programs (→gfrConfidenceValues)
- 15:25, 26 October 2010 (hist) (diff) FusionSeq List of programs (→gfrConfidenceValues)
- 22:11, 23 October 2010 (hist) (diff) FusionSeq Test Datasets (→BAM)
- 21:03, 23 October 2010 (hist) (diff) m FusionSeq Test Datasets
- 21:02, 23 October 2010 (hist) (diff) m FusionSeq Test Datasets
- 20:59, 23 October 2010 (hist) (diff) N FusionSeq Test Datasets (Created page with 'Two datasets are available to test FusionSeq: NCIH660 and GM12878 cell-line data. These datasets are part of FusionSeq dataset, published in [http://genomebiology.com/2010/11/10/…')
- 17:16, 23 October 2010 (hist) (diff) FusionSeq
- 17:12, 23 October 2010 (hist) (diff) How to execute FusionSeq
- 02:09, 23 October 2010 (hist) (diff) FusionSeq List of programs (→gfrConfidenceValueTranscript [deprecated])
- 02:03, 23 October 2010 (hist) (diff) FusionSeq List of programs (→gfrConfidenceValues)
- 01:44, 23 October 2010 (hist) (diff) FusionSeq List of programs (→gfrConfidenceValues)
- 01:14, 23 October 2010 (hist) (diff) m FusionSeq List of programs (→Other filters)
- 15:10, 13 October 2010 (hist) (diff) FusionSeq Requirements (→Provided)
- 15:04, 13 October 2010 (hist) (diff) FusionSeq Requirements (→Provided)
- 14:54, 13 October 2010 (hist) (diff) FusionSeq Requirements (→Provided)
- 14:48, 13 October 2010 (hist) (diff) m FusionSeq Requirements (→Provided)
- 14:45, 13 October 2010 (hist) (diff) m FusionSeq Requirements (→External)
- 11:17, 13 October 2010 (hist) (diff) Installation and Configuration of FusionSeq (→Installing and configuring FusionSeq)
- 11:10, 13 October 2010 (hist) (diff) m FusionSeq Requirements (→External)
- 11:29, 5 October 2010 (hist) (diff) Summer Jobs and Undergraduate Research positions (→Undergraduate Researcher in Bioinformatics at Yale)
(Latest | Earliest) View (newer 100) (older 100) (20 | 50 | 100 | 250 | 500)