PeakSeq

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(Additional Resources Related to PeakSeq)
(Additional Resources Related to PeakSeq)
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= Additional Resources Related to PeakSeq =
= Additional Resources Related to PeakSeq =
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Yale Chip-seq Data Pipeline
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=== Yale Chip-seq Data Pipeline ===
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Software download
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Software download  
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Illumina pipeline (wrapper for Illumina pipeline)
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[http://array.mbb.yale.edu/pipeline/illumina.html Illumina pipeline] (wrapper for Illumina pipeline)
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Chip-seq scoring pipeline (runs PeakSeq)
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[http://array.mbb.yale.edu/pipeline/scoring.html Chip-seq scoring pipeline] (runs PeakSeq)
Also, one might want to consider ChipSeqSim : http://papers.gersteinlab.org/papers/chip-seq-simu/
Also, one might want to consider ChipSeqSim : http://papers.gersteinlab.org/papers/chip-seq-simu/
Contact Joel Rozowsky at  joel DOT rozowsky AT yale DOT edu.
Contact Joel Rozowsky at  joel DOT rozowsky AT yale DOT edu.

Revision as of 09:05, 4 October 2010

Additional Resources Related to PeakSeq

Yale Chip-seq Data Pipeline

Software download

Illumina pipeline (wrapper for Illumina pipeline)

Chip-seq scoring pipeline (runs PeakSeq)

Also, one might want to consider ChipSeqSim : http://papers.gersteinlab.org/papers/chip-seq-simu/

Contact Joel Rozowsky at joel DOT rozowsky AT yale DOT edu.

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