https://info.gersteinlab.org/index.php?action=history&feed=atom&title=ENCODE-Nets_Network_Viewer 2026-04-17T17:39:00Z Revision history for this page on the wiki MediaWiki 1.42.6 https://info.gersteinlab.org/index.php?title=ENCODE-Nets_Network_Viewer&diff=1879&oldid=prev 2012-04-20T10:19:21Z

<p><span dir="auto"><span class="autocomment">Installation</span></span></p> <table style="background-color: #fff; color: #202122;" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 10:19, 20 April 2012</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l3">Line 3:</td> <td colspan="2" class="diff-lineno">Line 3:</td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>== Installation ==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>== Installation ==</div></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>The viewer is self-contained. This viewer only requires that PHP to be installed.  Installation simply involves dropping the contents of this  directory into a directory in your web root.</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>The viewer is self-contained. This viewer only requires that PHP to be installed.  Installation simply involves dropping the contents of this  directory into a directory in your web root. <ins style="font-weight: bold; text-decoration: none;">To add network files, copy them in to the &lt;code&gt;/data&lt;/code&gt; directory and reload the viewer. The viewer supports the following file formats:</ins></div></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br></td></tr> <tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">To add network files, copy them in to the &lt;code&gt;/data&lt;/code&gt; directory and reload the viewer. The viewer supports the following file formats:</del></div></td><td colspan="2" class="diff-side-added"></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* SIF</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* SIF</div></td></tr> <tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* GraphML</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* GraphML</div></td></tr> </table>

Public https://info.gersteinlab.org/index.php?title=ENCODE-Nets_Network_Viewer&diff=1878&oldid=prev 2012-04-20T10:17:23Z

<p>Created page with &#039;The [http://encodenets.gersteinlab.org/cyto/ ENCODE-Nets network viewer] allows networks and graphs to be visualized interactively in the browser. Nodes and edges may be manipula…&#039;</p> <p><b>New page</b></p><div>The [http://encodenets.gersteinlab.org/cyto/ ENCODE-Nets network viewer] allows networks and graphs to be visualized interactively in the browser. Nodes and edges may be manipulated and selected to view detailed information. The network viewer uses Cytoscape Web to render the networks.<br /> <br /> == Installation ==<br /> <br /> The viewer is self-contained. This viewer only requires that PHP to be installed. Installation simply involves dropping the contents of this directory into a directory in your web root.<br /> <br /> To add network files, copy them in to the &lt;code&gt;/data&lt;/code&gt; directory and reload the viewer. The viewer supports the following file formats:<br /> * SIF<br /> * GraphML<br /> * XGMML<br /> <br /> == Source ==<br /> <br /> The source code for the network viewer may be found at the [https://github.com/gerstein/network-viewer lab Github].</div>

Public